Gene Rpic12D_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0172 
Symbol 
ID8017795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp180389 
End bp181168 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID644828954 
ProductSporulation domain protein 
Protein accessionYP_002980154 
Protein GI241661794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTC GCCTCGCCCT GCTGCTCCTG CTGCTCGTCA ACGGCGTTCT GCTCGCGGCC 
AATACCGGCG TGTTCGGGCC AGAAGTGTCC AAGGCGTGGT TCGAGAGCGA GCGCGAGCCT
GACCGCATGC GGCGCCAGAT CCGCACCGAA GAGATCCGTA TTCTCCAACC GGCACCGGCT
TCTTCACCGG CTGCTGCCGT ACCCAAATCG GCGCCGGGCT CGCCGGAGGC CTCCCCGCCT
GCCGCGTCAG GCACGCAAGC CAACCTCGAG CCTACGGCCC TGACGACCGC TGCTGCTGGA
AACGGCGGCA CCTGCACCGA ACTGGGCGGC CTGACCGAAG CACAAGCCAC GCGCAGCATT
GATCAGCTCA GGCAGGTGGC GGGCGTGCAG GTCGAGCGCT TCACGCGCCA GGAAGACAAC
CGCTGGTGGG TCCACATGCC GGCACGCGAC ACGCGCGACG ACGCCGAGCG CAAGGTGTCT
GAACTCAAGC GCCGCAACGT GGCGGATTCA GCCATCGTGC AGGAAGGCAA TACGTTCGTG
GTATCGCTGG GCTTGTTTCG CGACAAGGAG CGCGCGCAGC AGCGCCTCGA TGAACTGCGC
GCCAAGGACG TGCGCACGGC CGTGGTCACG CAAACGCGCC GGCTTGGCTC GCAGACGTCG
CTGCGCGTGA CCGCCTCCGC CGACGCGGCT TCGGGCGTCG CAGCCCAACT GGCCGCGCTG
AAGAAAACCC TGGGCGCCGA AGACCTGCAC GCGTGCGCAG CGGTCACGGC ATCGCGCTAA
 
Protein sequence
MTLRLALLLL LLVNGVLLAA NTGVFGPEVS KAWFESEREP DRMRRQIRTE EIRILQPAPA 
SSPAAAVPKS APGSPEASPP AASGTQANLE PTALTTAAAG NGGTCTELGG LTEAQATRSI
DQLRQVAGVQ VERFTRQEDN RWWVHMPARD TRDDAERKVS ELKRRNVADS AIVQEGNTFV
VSLGLFRDKE RAQQRLDELR AKDVRTAVVT QTRRLGSQTS LRVTASADAA SGVAAQLAAL
KKTLGAEDLH ACAAVTASR