Gene Rpic12D_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0109 
Symbol 
ID8017732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp116763 
End bp117542 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID644828891 
Productenoyl-CoA hydratase 
Protein accessionYP_002980091 
Protein GI241661731 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGG ACCCGGAACT CCTCATCGAG CGGCGCGGAC AGGCGCTGTG GTTGACCATT 
CAGCGCGAAG ACCGCCGCAA TGCGATCAGC GCCGCCGTGC TTGAAGCGCT CACAGCTGCA
TTGGCTGACG CCAGCCGCAA CACTTCTGTG CGCGCCGTGG TGCTGACCGG CACCGGCACG
CGTGCCTTCT GTGCCGGCGC GGATCTGCAG ACCGGACAGT CCTTTCGCTT CGACTATTCC
CAGCCGTACC AAGCCCTGGC GGATCTGTTT CGCCAGGCGC GCCGCTGCAC CGTGCCGCTC
ATCGCCCGCG TGAATGGCGC TTGCATGGCG GGCGGCATGG GTTTGCTGGC GATGTGCGAT
CTGGCCGTGG CCAGCCGCAG CGCGACGTTC GGGCTCCCGG AAGTGAAGGT CGGCGTGTTT
CCGGCGCAGG TGCTGGCCGT GCTGCAGCAC CACTTGCCGC GCCGCGTACT GAACGAGCTG
TGCCTGACGG GCGAGCCGAT GAGCGCAGAG CGCGCGCTCG CCGCAGGGCT CGTCAACGAA
GTCGCGGAAC CTGCAGCGCT TGATGGGGCC GTCGACGCAT TGCTTGCGCG GCTGCTGGAC
AAATCGCCGT CGGCCATTCG GCGCGGACTG TACACGCTCA AGCAGGTTGA ATCACTCAGC
TTCGAGCAGG CCATTGCATT TACCGAAAGC CAGATCGGCC TGTTTGCCCT GACCGAAGAT
GCGCAGGAAG GGCAAGCCGC CTTTCGTGAA AAGCGCGCGC CTAACTGGAC GGGCCGCTGA
 
Protein sequence
MSTDPELLIE RRGQALWLTI QREDRRNAIS AAVLEALTAA LADASRNTSV RAVVLTGTGT 
RAFCAGADLQ TGQSFRFDYS QPYQALADLF RQARRCTVPL IARVNGACMA GGMGLLAMCD
LAVASRSATF GLPEVKVGVF PAQVLAVLQH HLPRRVLNEL CLTGEPMSAE RALAAGLVNE
VAEPAALDGA VDALLARLLD KSPSAIRRGL YTLKQVESLS FEQAIAFTES QIGLFALTED
AQEGQAAFRE KRAPNWTGR