Gene Rpic12D_5087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5087 
Symbol 
ID8017376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp378978 
End bp379883 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content56% 
IMG OID644828775 
Producthypothetical protein 
Protein accessionYP_002979975 
Protein GI241589950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.277852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGT TCCCCAATGT TATGCAAGGT GCAGTTCAAC CGGCTTGGCG CGGAAAGAAG 
AAGGCCGTCT TTGGCCTCGA CCGGGAAAGC TACTCTGTGC CCGTCAGTGA CGACGAGTAC
CACTCTGACC GCGAGTACGT GTCGTCGACG CAGTTGAAGT CGATCCTCAA GACTCCCAAA
CACTTTCTTG CTGCGGTTCA AGGAGCCGGC AAGGACAAGC AGGTGTTGGA ATTCGGACGT
CTTGCGCATA TGGCGGTGTT TGAGCCCTGG CGCTTTGAGG ACATGGTTCT CCCATACGAT
GGCGAGTTCG ACCGGCGACT TCGCAATTGC AAGACGTTCA TCGCGGATCA TCCGAACCAT
ATTGTGATTG GCCAGGACAA GTTCGACGCA CTCCTGTCTA TGCGCGAAGC AGTTCGAGCA
CACCATTTTC GCGGCCGAAC ACTTGGAGAG TGGTTCGACG AGGGAGAGCA GGAAAAGGCG
ATCTACTTTG TTGAGCGGGT GACGAATGTC AAATGCCGGA TCAAGGTGGA CAACCTGCAC
CCCGAGTTCA TCTTTGATCT CAAGTCGACG GTTGACGTTC GACCTGCCGC ATTCAACGGA
TCGGTTCACG CTTACCACTA CGACTTGTCG GCCTTCATGT ACCAGACAGG CGTGCAGTAC
TTCACCGGCG AAGAGAGGCC GTTTGTCTTC ATCGCTGTGG AGAAGGAAGC GCCCTACAGC
GTCATGACCT ACACCGCCGG AGACTCGCTG CTCGACAATG GGGCCCAGAA GTTCGAGGAC
GGTCTGAATC GCTTGAACCA TGCTCGCGCA CACGATTCTT GGCCTGGGTA CGCCGGGGAC
TACGTGCTCG AAGTGGACCG TTGGCATGAA TACCAATCGA ACCACGACAT CCTGGCTTCG
GCCTAG
 
Protein sequence
MNAFPNVMQG AVQPAWRGKK KAVFGLDRES YSVPVSDDEY HSDREYVSST QLKSILKTPK 
HFLAAVQGAG KDKQVLEFGR LAHMAVFEPW RFEDMVLPYD GEFDRRLRNC KTFIADHPNH
IVIGQDKFDA LLSMREAVRA HHFRGRTLGE WFDEGEQEKA IYFVERVTNV KCRIKVDNLH
PEFIFDLKST VDVRPAAFNG SVHAYHYDLS AFMYQTGVQY FTGEERPFVF IAVEKEAPYS
VMTYTAGDSL LDNGAQKFED GLNRLNHARA HDSWPGYAGD YVLEVDRWHE YQSNHDILAS
A