Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5030 |
Symbol | |
ID | 8017457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | - |
Start bp | 314029 |
End bp | 315354 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644828718 |
Product | protein of unknown function DUF1173 |
Protein accession | YP_002979918 |
Protein GI | 241589893 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.015581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCG ACCCTGACGT TCGAATAGGC TCACTTCGCG TAAAGCTTTC CGCACTGCGC GAGGCGCCTG CTCGCTACTC TCGCTATTTC GAAGAGGCCA AAGTCAATCC TGGCCACGGC TGGTGCCTGT GTGGCCCCGC CCCCCAACGA TTGGTGATTC GGCGCAAGTC TCAGAGCGGC TCTGCTGCGG TCTTCTTCTT GGCCGGGTGG CCAGATGAGG GCGAGGCCCA CGATCCCCAG ATGTGCCCGT TCCACAAGGA ACCGGAACAC GAATCTGGCC AGACGTCTGA AAGCAAATCC TGCTTCGCGG AAGCGGCCGA CGGCACATTC CGCATCACGC CCGCATACTC GGTGTCGCTG AAAATCAGCG CAGCTACCCG CACCCTCGAT CCGATCGAAC AGTCAGACAA ACCCTCGAAG TCCACGCGTG GGGCCACTCT ACTAGCGACG CTGCAGTACC TCTGGAACGA GGCAGGACTG CACCGATGGC GCGCCGGTTG GCAACGCGAT TGGGGGCGTG TCCGCTATGA ACTCGAAGCG ACTGCGCAAA ATGGGAAGAT CGGGAAGCGC GCTCTCGCGG ACTTGCTCTA TGTGCCGCCA CGCTACTCGC CGACGACGGC AAATAAGGCC AAGGAAGAGC TCGGCGCCCG CTTGGCCCCC CTTATCTCTT CCGCCAAATC CTTTCTGGAG GCACAGAAGC GAGTCTCGGC CGGCAAATCA GCCTCTGCGG AGCGTGAAAC TCTCTTCATC ATTGCCCCTC TTCGCTCGCT CGAACTGGGG CAGTACGACA GCTATATGCT CCACCTCCGG CATATTGGCC AACCTGTGTA CTGCAAGTCG TCCCTCATGG AGCGCCTGAA GCATCGGTTC GGTCGATCGT TGGACACACT GTCCGTGGGC GAAGGTCACG TTGTTGGAAT CTTCCACGTC GAAGGCACCC CGCGCGGCCA CCTCCAGCTG ATTGATGCGG GGTTCATGCG CGTCTCAAGT CGGTTCATTC CGGTGGAGTC CTCCTACGAA GAATTGGTCG CTGATGCGCT TGTTGCAGCT GACCGCGCTT TCACGAAGCC GATCCGCCTG GAGATGGGTG ACGACACGCT TTCTGGCAAG GTGCTTCCCG ACTTCATCCT CTATGACACG ACAGCACCTC GGTGCTACAT GGAGGTCTTC GGCGTCCGAG GGCGGGAAGA CTACGATGCG CGCAAGCAGG AGAAACGCCA GGTCTACGAT CGGGCCGGTG TGTTGCTATG GGACTGGGAT CTCTCGGTGT CCCAAGCGAT GCCACCGCTA CCAATTCGGG TCGTCCGAAA AGGAGGTCTC ACCTAG
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Protein sequence | MTADPDVRIG SLRVKLSALR EAPARYSRYF EEAKVNPGHG WCLCGPAPQR LVIRRKSQSG SAAVFFLAGW PDEGEAHDPQ MCPFHKEPEH ESGQTSESKS CFAEAADGTF RITPAYSVSL KISAATRTLD PIEQSDKPSK STRGATLLAT LQYLWNEAGL HRWRAGWQRD WGRVRYELEA TAQNGKIGKR ALADLLYVPP RYSPTTANKA KEELGARLAP LISSAKSFLE AQKRVSAGKS ASAERETLFI IAPLRSLELG QYDSYMLHLR HIGQPVYCKS SLMERLKHRF GRSLDTLSVG EGHVVGIFHV EGTPRGHLQL IDAGFMRVSS RFIPVESSYE ELVADALVAA DRAFTKPIRL EMGDDTLSGK VLPDFILYDT TAPRCYMEVF GVRGREDYDA RKQEKRQVYD RAGVLLWDWD LSVSQAMPPL PIRVVRKGGL T
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