Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5025 |
Symbol | |
ID | 8017452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 309816 |
End bp | 310454 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644828713 |
Product | hypothetical protein |
Protein accession | YP_002979913 |
Protein GI | 241589888 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.707779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCC GTGACACGTA CCTCCAGTCG CAGTTTCCGA CATTGCCCGC ACCAAAGTTC GCACCGCTTG AGCGGCTCGA AAGCGTTGGA CACCGCTTCC TGGTGGGCAG TAACGGCCTG GCGCTTGAAG TTCGGCGCCC TTGGCTGTAC ATGCGCAAGC TGGCCTTGAA GAACGAGGGC GGTTTGGCGC TTCCCTACGG GGAAGTGTCG GAGGCTTTCG ATTTGCTGTG TGGTCCGGTG CCTCGCAGTC TGCTTTGGCA GTTTGGGGAG CAAGCAAGAA AGGCAGGAGA CATTGAGACA GCCGGGTGGA TCACGTGGAG TGAGCACACC CGACAGTTTC GGTATCTCCC GTTGGTCGAG CGGCGGGCTT CATCGGTGGA GGTTGTTGTA GACCGCCCGG AGCTTGCACC TGGTGAGCAC CTGATCGTGG ATCTTCACAG CCACGGTAGT GCGCCGGCGT ACTTCAGTTC GACGGATGAC AAGGACGATC GAGGAGAGGT GAAGTTCTCG GTGGTGTATG GTTTTTGCCA CCGGCCAGAC CTTTCCGAGT TCGACGTTGC AGCGCGCCTG TGTGCCATCG GCATAACCAT CCCCGTGAGT GAACAGTTTT CTCTCGAGGA GGTGCGTCAT GCAGCGTGA
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Protein sequence | MDFRDTYLQS QFPTLPAPKF APLERLESVG HRFLVGSNGL ALEVRRPWLY MRKLALKNEG GLALPYGEVS EAFDLLCGPV PRSLLWQFGE QARKAGDIET AGWITWSEHT RQFRYLPLVE RRASSVEVVV DRPELAPGEH LIVDLHSHGS APAYFSSTDD KDDRGEVKFS VVYGFCHRPD LSEFDVAARL CAIGITIPVS EQFSLEEVRH AA
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