Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4988 |
Symbol | |
ID | 8017415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 279762 |
End bp | 280646 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644828676 |
Product | Gp37Gp68 family protein |
Protein accession | YP_002979876 |
Protein GI | 241589851 |
COG category | [S] Function unknown |
COG ID | [COG4422] Bacteriophage protein gp37 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.119264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATCG AAACCGGCAT CTCCTATGCG AAGTCCACCA TCAACGGATG GATTGGCTGC ACTCAGATCG GCCGTGGCTG CGACGGGTGC TATGCGTTAG CGGGCGATAT GCGGTTTCAC GGTGGAAAGC ACTGGGGGCC AGGTGCGCCA CGCCAGCGGA CTGCCGCATC GAACTGGAAC AAGGCATTCA CCTGGAATCG CCGTGCAGCC ATAAGCGGTG AATTCTGGCC GGTGTTCTGG AACACCCAAT CGGACATGTT CGACAACGAG ATTGAACACC AATGGCGGGC CGACGCCTGG CACCTTATGG CTCAAACGCC ATACCTGACG TGGCTGATAG TCACGAAGCG CATTGGGAAC GCGAAGCGAA TGCTGCCGCC CGACTGGGAA TCGGGTTATC CGAACGTCTG GCTGATCGCA ACTGTGGTCA ATCAGGAAGA GGCGGAGCGG GATATCCCCA AGCTCGTGGA AATCGATGCC AGCGTTAAAG GCATCAGCCA TGGGCCAGGG CTTGGGCCGC TGGATCTGAC ATCCCAACTG AAATCCGGGC GGCATGCTGG AACAGCGGCC ATCGAGAAGT TGGACTGGAT CATTTCCGAA GGGGAAAGCC GGCAGGGGAG TTGGGTGGCG CGAGAGTACA AGCTGGAGTG GGCGGAAAGC CTTGCGGAGC AGGCAAGCCG ATATGACGTG CCGTTTTTTA TGAAGCAGGC GGGGCATTTC CCAACCAAGG ACGGAGTCAA GGTTTCGTTG ACCGGTAAGG GTGCAGTAGT GGCTGAGTGG CCGGCTGCCC TGCAGCGCCA AGAATTCCCG GAAGGGAGGA TGCTGGCAGT TGAGGCTGAC TCGCCGGCGC CCACGGCTAA AGTCATCCAG CTTGCAGTGG CGTAA
|
Protein sequence | MAIETGISYA KSTINGWIGC TQIGRGCDGC YALAGDMRFH GGKHWGPGAP RQRTAASNWN KAFTWNRRAA ISGEFWPVFW NTQSDMFDNE IEHQWRADAW HLMAQTPYLT WLIVTKRIGN AKRMLPPDWE SGYPNVWLIA TVVNQEEAER DIPKLVEIDA SVKGISHGPG LGPLDLTSQL KSGRHAGTAA IEKLDWIISE GESRQGSWVA REYKLEWAES LAEQASRYDV PFFMKQAGHF PTKDGVKVSL TGKGAVVAEW PAALQRQEFP EGRMLAVEAD SPAPTAKVIQ LAVA
|
| |