Gene Rpic12D_4988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4988 
Symbol 
ID8017415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp279762 
End bp280646 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content59% 
IMG OID644828676 
ProductGp37Gp68 family protein 
Protein accessionYP_002979876 
Protein GI241589851 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.119264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCG AAACCGGCAT CTCCTATGCG AAGTCCACCA TCAACGGATG GATTGGCTGC 
ACTCAGATCG GCCGTGGCTG CGACGGGTGC TATGCGTTAG CGGGCGATAT GCGGTTTCAC
GGTGGAAAGC ACTGGGGGCC AGGTGCGCCA CGCCAGCGGA CTGCCGCATC GAACTGGAAC
AAGGCATTCA CCTGGAATCG CCGTGCAGCC ATAAGCGGTG AATTCTGGCC GGTGTTCTGG
AACACCCAAT CGGACATGTT CGACAACGAG ATTGAACACC AATGGCGGGC CGACGCCTGG
CACCTTATGG CTCAAACGCC ATACCTGACG TGGCTGATAG TCACGAAGCG CATTGGGAAC
GCGAAGCGAA TGCTGCCGCC CGACTGGGAA TCGGGTTATC CGAACGTCTG GCTGATCGCA
ACTGTGGTCA ATCAGGAAGA GGCGGAGCGG GATATCCCCA AGCTCGTGGA AATCGATGCC
AGCGTTAAAG GCATCAGCCA TGGGCCAGGG CTTGGGCCGC TGGATCTGAC ATCCCAACTG
AAATCCGGGC GGCATGCTGG AACAGCGGCC ATCGAGAAGT TGGACTGGAT CATTTCCGAA
GGGGAAAGCC GGCAGGGGAG TTGGGTGGCG CGAGAGTACA AGCTGGAGTG GGCGGAAAGC
CTTGCGGAGC AGGCAAGCCG ATATGACGTG CCGTTTTTTA TGAAGCAGGC GGGGCATTTC
CCAACCAAGG ACGGAGTCAA GGTTTCGTTG ACCGGTAAGG GTGCAGTAGT GGCTGAGTGG
CCGGCTGCCC TGCAGCGCCA AGAATTCCCG GAAGGGAGGA TGCTGGCAGT TGAGGCTGAC
TCGCCGGCGC CCACGGCTAA AGTCATCCAG CTTGCAGTGG CGTAA
 
Protein sequence
MAIETGISYA KSTINGWIGC TQIGRGCDGC YALAGDMRFH GGKHWGPGAP RQRTAASNWN 
KAFTWNRRAA ISGEFWPVFW NTQSDMFDNE IEHQWRADAW HLMAQTPYLT WLIVTKRIGN
AKRMLPPDWE SGYPNVWLIA TVVNQEEAER DIPKLVEIDA SVKGISHGPG LGPLDLTSQL
KSGRHAGTAA IEKLDWIISE GESRQGSWVA REYKLEWAES LAEQASRYDV PFFMKQAGHF
PTKDGVKVSL TGKGAVVAEW PAALQRQEFP EGRMLAVEAD SPAPTAKVIQ LAVA