Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4901 |
Symbol | |
ID | 8017616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 205737 |
End bp | 206699 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644828589 |
Product | protein of unknown function DUF159 |
Protein accession | YP_002979789 |
Protein GI | 241589764 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.371034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCTATA GCGCCCTCGT GAGGGCTCAG TACCAGGACT TTATCCGGTT GTTCGGCGCG GAGATCAGCC TCCGCGAGTT TGTCGAACTG TATGTCGAGC GAAGCGAAGA CAGCAAGCTG AATATCCCCA AGGCAATGTC GGCCGCTTTC GTTCACGACC CAACGGGCCC AAACGAGCGC CGCATCGTAG AGCTCATTCA AGAGTTCGAT GCGGCCATGG AAACTAAGCT GCAGCAGGAT CTATTCAAGC AGCGTGAGCG GCAAATCAAA GCGCAGCGCA AGCTGGAGGC CAAGTTCACC AAGACCGCCA GCGAAGACCT GCGCATCTCG ACCGACAAGG TTGAGGAAGC CAAGTGGAAG CTGGCCAACA TGGGCTATAC CGACCTAAAG TCGGGCGATT CACGCATCTT CCCGAAGTGG TATGCCCCGG TGATGATCGT GGAAAATGGC CGTCGCGTTG TCAAGCCGAT GCGCTTTCTC CTGCGGCCGG CCGGCATGCC TGCCTCGTTC GATGTGACGC ATGACGGGGC GTTCAACGCT CGTCGGGATA ATCTGCGTCA CTTCTGGCGC AAGCAGTTTG GCCACAACCA CGGCCTAATT CTGGTGGACC GGTTTTACGA GAACGTAAAG CAGCACCGCT TGGAACAGCG CGAGCTCGCG CCTGGGGAGA AACCGGAAAA CGTGCGGCTT GAGTTTGAGC CTAGCCCATC GCACCTGATG CTCGTGCCTT GCATTTGGTC CCGATGGACC GCGCCTGGAC AAAAGGACTT GCTCTCCTTT GCCGCGATTA CAGACGAACC GCCCGCTGAG GTAGCTGCCA CTGGTCATGA CCGCTGCCTG GTTCCGATCA GGCCCGACAA TGTAGAGCCT TGGCTGAATC CAGAACGGAG CACTCTCGAT GCCCTCGACC AGATCCTTGA GGACAAAGAG CACCCGTACT ATGAGCACCG ATTGGCTGCT TAG
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Protein sequence | MCYSALVRAQ YQDFIRLFGA EISLREFVEL YVERSEDSKL NIPKAMSAAF VHDPTGPNER RIVELIQEFD AAMETKLQQD LFKQRERQIK AQRKLEAKFT KTASEDLRIS TDKVEEAKWK LANMGYTDLK SGDSRIFPKW YAPVMIVENG RRVVKPMRFL LRPAGMPASF DVTHDGAFNA RRDNLRHFWR KQFGHNHGLI LVDRFYENVK QHRLEQRELA PGEKPENVRL EFEPSPSHLM LVPCIWSRWT APGQKDLLSF AAITDEPPAE VAATGHDRCL VPIRPDNVEP WLNPERSTLD ALDQILEDKE HPYYEHRLAA
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