Gene Rpic12D_4901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4901 
Symbol 
ID8017616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp205737 
End bp206699 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content58% 
IMG OID644828589 
Productprotein of unknown function DUF159 
Protein accessionYP_002979789 
Protein GI241589764 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.371034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTATA GCGCCCTCGT GAGGGCTCAG TACCAGGACT TTATCCGGTT GTTCGGCGCG 
GAGATCAGCC TCCGCGAGTT TGTCGAACTG TATGTCGAGC GAAGCGAAGA CAGCAAGCTG
AATATCCCCA AGGCAATGTC GGCCGCTTTC GTTCACGACC CAACGGGCCC AAACGAGCGC
CGCATCGTAG AGCTCATTCA AGAGTTCGAT GCGGCCATGG AAACTAAGCT GCAGCAGGAT
CTATTCAAGC AGCGTGAGCG GCAAATCAAA GCGCAGCGCA AGCTGGAGGC CAAGTTCACC
AAGACCGCCA GCGAAGACCT GCGCATCTCG ACCGACAAGG TTGAGGAAGC CAAGTGGAAG
CTGGCCAACA TGGGCTATAC CGACCTAAAG TCGGGCGATT CACGCATCTT CCCGAAGTGG
TATGCCCCGG TGATGATCGT GGAAAATGGC CGTCGCGTTG TCAAGCCGAT GCGCTTTCTC
CTGCGGCCGG CCGGCATGCC TGCCTCGTTC GATGTGACGC ATGACGGGGC GTTCAACGCT
CGTCGGGATA ATCTGCGTCA CTTCTGGCGC AAGCAGTTTG GCCACAACCA CGGCCTAATT
CTGGTGGACC GGTTTTACGA GAACGTAAAG CAGCACCGCT TGGAACAGCG CGAGCTCGCG
CCTGGGGAGA AACCGGAAAA CGTGCGGCTT GAGTTTGAGC CTAGCCCATC GCACCTGATG
CTCGTGCCTT GCATTTGGTC CCGATGGACC GCGCCTGGAC AAAAGGACTT GCTCTCCTTT
GCCGCGATTA CAGACGAACC GCCCGCTGAG GTAGCTGCCA CTGGTCATGA CCGCTGCCTG
GTTCCGATCA GGCCCGACAA TGTAGAGCCT TGGCTGAATC CAGAACGGAG CACTCTCGAT
GCCCTCGACC AGATCCTTGA GGACAAAGAG CACCCGTACT ATGAGCACCG ATTGGCTGCT
TAG
 
Protein sequence
MCYSALVRAQ YQDFIRLFGA EISLREFVEL YVERSEDSKL NIPKAMSAAF VHDPTGPNER 
RIVELIQEFD AAMETKLQQD LFKQRERQIK AQRKLEAKFT KTASEDLRIS TDKVEEAKWK
LANMGYTDLK SGDSRIFPKW YAPVMIVENG RRVVKPMRFL LRPAGMPASF DVTHDGAFNA
RRDNLRHFWR KQFGHNHGLI LVDRFYENVK QHRLEQRELA PGEKPENVRL EFEPSPSHLM
LVPCIWSRWT APGQKDLLSF AAITDEPPAE VAATGHDRCL VPIRPDNVEP WLNPERSTLD
ALDQILEDKE HPYYEHRLAA