| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4800 |
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| Symbol | |
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| ID | 8017512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | - |
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| Start bp | 135609 |
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| End bp | 136970 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644828489 |
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| Product | HipA N-terminal domain protein |
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| Protein accession | YP_002979689 |
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| Protein GI | 241589664 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTTC GGGCCCTAGC CATCTACATT GGCCAACTGC GCGTCGGCAC CCTGTTCAAG
TATGGGGTGG ATGACCCGAT TATTCGCTTC GTCGCCGACG AAGACTACGT CGACCTCGTC
GACCCGCCGA CGCTCTCTCT CTCGATGCAG GCGGAAGATC CGGCGCAGCA GCGCGCGTTC
TGGGCAGATG TGACGCAGCC GGTGTTCAAC GGCAGCTATT CAGCCAAGCG CGACAGCTTT
CTCCTCCCGG CATTCTTTCA GGGATTGCTG CCGGAGGGGG TGTTCCGCGA CCACATCGCT
GCAGAACGAG AATGCGCGCC TGATGACCAC TTCGAAATGT TGGCAGCGAC CGGGCGCGAC
CTGCCCGGCA ACGTGTCTGC GCGGCCTGCG GAGCTCGACT TTCAGGAGGT GGCGCACCTG
GTCACACAGG ACGCCGACTC GCTCGAAATG AGCGTGGTCA ATGAGCCGAT GGAGGACGGT
ATATCCGTGT CCGGCATGCA AGCCAAGCTC GGTGTACTGA AGGAAGGCGA CCGCTACGTG
GCCCGCACCA AGATGCAAGA CACGCACGTT ATCGCCAAGC TGCCCGTGGT GGGTTACGCC
CTTCTGCCTG AGCTGGAAGA TCTCTCCCTG CGCCTGGCCT CCGCGGCAGG GGTCACGGTC
TGCGAAGCGC TGCTTGAGCC GCTGGAGAAA CTCGTGGTCG AGCACGGCTA TGACCTCGGA
GACGAGACGA CCGGCAAGAC GAACTTTCTG GCCGTCACGC GGTTCGACCG TTTCCAGGGT
GGACGAGTCC ATGCCGAGGA CTTCGGGCAG ATTCTGGAGA TTCAACCGGA GAACAAGTAC
CGGTCGAGTT ACTTCGACAT CGCCGCCGTC ATGCTGGACG AGCCTACGCT TGGAGAGCCG
GCCGTTCACG AGCTGCTACG TCGCCTCACG GTCAATGAGT TGCTGGGAAA CCCGGACATG
CACGTCAAGA ACATTGGCGT GCTCTACCTG GATGGCGTGA ACCCAACGCT TTCACCGGCC
TACGATATCG TGGCCTACAG CGCTTACCAG AACCGCCTTG GCCATGGGCT CTACATCGTC
CCGCCAGAAC TGTTGCCGGC TCCGCCCAAG GACAAGCCGG CGCCAAAACA GCGCCTGAGC
CCGCTGCTGG TACGCAAGTT CAGCGAAAAC CTCGGCCTGA CCGAGAAACC GCTGCAGACG
GTTATCACCC AGACGGTGCT CAGCGCGGTC AAGGCCTGGC CAAAGATGAT TGAAGACTCC
AGGCTCACCA CCAAGCAGAA GGAAAACCTG CTGGGGTACT TCAATAGCCA GCCGCTGGTG
ACCTCCGCTC GTGCGCGCTT GGAGCGTCGC GCTGCTGCGT AG
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| Protein sequence | MLFRALAIYI GQLRVGTLFK YGVDDPIIRF VADEDYVDLV DPPTLSLSMQ AEDPAQQRAF
WADVTQPVFN GSYSAKRDSF LLPAFFQGLL PEGVFRDHIA AERECAPDDH FEMLAATGRD
LPGNVSARPA ELDFQEVAHL VTQDADSLEM SVVNEPMEDG ISVSGMQAKL GVLKEGDRYV
ARTKMQDTHV IAKLPVVGYA LLPELEDLSL RLASAAGVTV CEALLEPLEK LVVEHGYDLG
DETTGKTNFL AVTRFDRFQG GRVHAEDFGQ ILEIQPENKY RSSYFDIAAV MLDEPTLGEP
AVHELLRRLT VNELLGNPDM HVKNIGVLYL DGVNPTLSPA YDIVAYSAYQ NRLGHGLYIV
PPELLPAPPK DKPAPKQRLS PLLVRKFSEN LGLTEKPLQT VITQTVLSAV KAWPKMIEDS
RLTTKQKENL LGYFNSQPLV TSARARLERR AAA
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