| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4748 |
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| Symbol | |
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| ID | 8017323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 93144 |
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| End bp | 93905 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644828437 |
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| Product | hypothetical protein |
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| Protein accession | YP_002979637 |
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| Protein GI | 241589612 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.439827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAAGG TGATCGCAAT ACTAATCTCA GCGCTCTTGT CGAGTTCGTG TTTCGCCGGC
GGCATGCCGG TGTTCACGGG TGGCCTTGTG TTCGATCCGT CGAATTTCGC CCAGAACATT
GTCAAGGCGG GCCAGACGGC GCAGAGAGTC GTGACGCAAG CCCAGCAGTA TGCGACGCAG
ATCCAGCAGT ACCGGATGGC GATCCAACAG CTGAAATCTC TCGATCCCCG ACAGCTGGCG
GCCTTGGGGG GGGTATCGAT GACCGATCTG CAAGCTGTCT ACAACTACAT CGGCAGCTTG
AAGAATGTCA TGGGGGATCT GAACAACGTT TCCGATGCCT TGAACAAGCG GTTCACAGAG
GCCCAGCTTT CGGGGCGCAG CTGGCAGGAC TACCTTGCTT CGCAACAGGA TGCGGTCAAG
GCCAATGTCA AAGCGGCGCA GATCCGCGCC CAGAACGAAG CGGCACTACT GAAGTCAGTT
CAGGACGATT TCGCAATGGC TGCTGAATGG CAGGCGCAGA TTCCTGCCAC TCTGGGAACA
AACGAAGACG TGCAGCTCCT CAACGCCCAG ATGAATCGAC TTGTTATGCA AAACGCGCAA
GTCATGAAGC TGCTGGTGGA CCAGAACGGC GCGATGAAAT CCGCTGCACA GATGGATGAA
CTGGCGAAGC GAAAGCAGGA CGCCGAATCA CGAAGCGTGT TTTACAACGC CATTCATCAA
GACGGCCAGA ACACCAAGTC GTTGGTGGAT GGGCTCCGCT GA
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| Protein sequence | MNKVIAILIS ALLSSSCFAG GMPVFTGGLV FDPSNFAQNI VKAGQTAQRV VTQAQQYATQ
IQQYRMAIQQ LKSLDPRQLA ALGGVSMTDL QAVYNYIGSL KNVMGDLNNV SDALNKRFTE
AQLSGRSWQD YLASQQDAVK ANVKAAQIRA QNEAALLKSV QDDFAMAAEW QAQIPATLGT
NEDVQLLNAQ MNRLVMQNAQ VMKLLVDQNG AMKSAAQMDE LAKRKQDAES RSVFYNAIHQ
DGQNTKSLVD GLR
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