| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4712 |
|---|
| Symbol | |
|---|
| ID | 8017289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | - |
|---|
| Start bp | 49989 |
|---|
| End bp | 50774 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644828403 |
|---|
| Product | flagellar basal-body rod protein FlgG |
|---|
| Protein accession | YP_002979603 |
|---|
| Protein GI | 241589578 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4786] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.374892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0910143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTT CTTTGTGGAT CTCAAAAACT GGAATGGAGG CCCAACAAAC GCAACTAGAC
GTTGTCTCCA ACAATCTGGC AAACGTTAAT ACCACGGGCT TCAAGCGCTC GCGTGCCGTG
TTCGAGGACC TGCTGTATCA GAACGCGCGC GAGCCGGGGG CCCAGTCGTC ACAACAAACG
GCGTTGCCTT CGGGCATGCA GATCGGTACC GGCACGCGGA TTGTGGCCAC CTCGCGTTTG
CATTCGCAAG GCAATCTTTC AAAAACTGGC AATGCGACGG ACGTAGCCAT CAACGGCAAT
GGCTTCTTCC AAGTGCAAAG ACCTGACGGC ACGCTGGCCT ACACACGAGA CGGCAACTTC
CAGATCAGCG CGCAGGGGCA ACTCGTGACC TCAAGCGGCT ATTTGGTGCA GCCTGCCATG
ATGGTGCCGC GCAATGCCAC GAGCTTGATG ATTGGCAAAG ACGGTGTTGT TACGGTTACG
ACGCCAGGTA TGGTCAATCG AACGCAAGTG GGGGCGTTTC AACTCGCCAA TTTCGTCAAT
CCGGCCGGCT TGCGTAGTCT GGGAGAGAAC CTGTATGCCG AGACTGAAGC TTCGGGCGGT
GCAAACCTAG CTGTCCCAGG AGGCAATGGT TTAGGCATGC TCCACCAGAA CTATGTTGAA
ACGTCCAATG TGAACGTGGT GGAGGAAATG ATTCAGCTGA TCCAAACGCA ACGCGCGTAT
GAGATCAACA GCAAAGCTGT GCAGACAGCC GACCGCATGC TTGAGAAGAT AGCACAACTC
AAATAA
|
|---|
| Protein sequence | MIRSLWISKT GMEAQQTQLD VVSNNLANVN TTGFKRSRAV FEDLLYQNAR EPGAQSSQQT
ALPSGMQIGT GTRIVATSRL HSQGNLSKTG NATDVAINGN GFFQVQRPDG TLAYTRDGNF
QISAQGQLVT SSGYLVQPAM MVPRNATSLM IGKDGVVTVT TPGMVNRTQV GAFQLANFVN
PAGLRSLGEN LYAETEASGG ANLAVPGGNG LGMLHQNYVE TSNVNVVEEM IQLIQTQRAY
EINSKAVQTA DRMLEKIAQL K
|
|---|
| |