Gene Rpic12D_4711 details

Gene Information

• Locus tag: Rpic12D_4711
• Symbol: flgK
• ID: 8017288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12D
• Kingdom: Bacteria
• Replicon accession: NC_012855
• Strand: -
• Start bp: 48021
• End bp: 49946
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644828402
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_002979602
• Protein GI: 241589577
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.402809
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.0701142
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTTCTT CTCTTCTGAA CATCGGGGCT TCTGGCTTGC GCACGGCTGG CATCCATCTG 
CAGGTGATAG GCAGTAACAT CGCCAACGTC AATACGCCGG GCTATTCACG TCAAGAAGTT 
GTCCAAACGG AGAATCCCCC ACACTACGGT GGCGTTGGCG ATCTCGGGCA AGGTGCGAAC 
GTCGCCACAG TGAAGCGCAT CTACGATCAG TTCCTGGCCG CGCAGGTGCA GAGTAGTCAG 
GCGGCCGCTA GCTCAGCAAA CCAACTCAAC AGCCTGCTGA GCAATCTAAG TCAGTTCATG 
TCGGACCGCA ACAGTGGGCT TAGTTCGGCA CTGACAAGCT TCTTCGATGC TGCGGACGGA 
TTGGTCTCCA AGCCATCGGA TGCAACAGCA CGTCATGTAT TCCTAGGTGC GATATCAGGT 
TTGCAGAGTC GCTTTAACTT GATTGCCGAA CAAGCGAGCG CGCTGGCAGA TCAGGTCAAC 
AGCCAAGTAC AAACTCAGAT TGGCGCTGTT AACGGTGCCG TGCGCCAGAT CGCCTCGCTG 
AATGACCAGA TTGTCAAGGC AGAGAGCTCT GCAGGCGCCC CCGCAAATGA TCTGCGCGAC 
CAGCGTGACC AGCTAGTGCA GACGCTCAAT CAATCGATCA AAGCGAGTTC AGTGGAGACC 
AGCGACGGCC AGTACAACAT CTACGTCGGA AACGGGCAGG CACTTGTGCA AGGCAATCGG 
AGTTTCGAGT TGACGACGGT GCCATCGCCG TACGACCCAT CTCAGCTTTC GGTTGGCTAC 
AAGAGCCCCG CCGGTACGGT CATCGTTGAC GATGCGCAGT TGGGTGGAGG GGCCCTGGGC 
GGCCTGATGG AGTTCCGCAG CAAAACACTT ATTCAGGCGC AGAACGGCGT GGGTCGGTTG 
GCCGCAGCTA TATCTGCCGA GGTGAACGCC CAAAGCAGGC TGGGCATGGA CGCCAACGGA 
AAAATGGGCG GCGACATCTT TTCGGTCGCT GGCCCCAGTG TTATGCCCCG CAGCGACAAC 
CGCGGCAGCG CCACACTTAC CGCCAGCATC ACCAATGCCA CCGCTACACC AGCCCATGAC 
TACCAACTCC GGTATCAAGG CGGTGTCTAT ACTGTTTCAC GCTATCCAGA TGGCTCAAAG 
GCCACCGTGG TGACGACTTG GCCGGCCACC GTCGACGGCA TCAGGTTGAA CCTGTCGGGC 
ACGATGCACA GCGGCGATTC GTTCTTGGTC CGCCCAACAG CCAATGCGGC GGCCACCATG 
AAAGTGCTGA CCACTGACTA CAGGACCATC GCGGCTTCAT CTGCCGTGGT GGCAGATGTC 
GGCGGCAACA ATAGGGGTAG TGGAGCTGTG ACGTCTGTTG GTATTAATGT GGTGGCCTTC 
CCCGCGGCGG CCGTGAAGCT GACCTACAAC GCATCTGCTG GAGGCTCGCT CACAGGTTTC 
CCAGGAAGTG TGACTGTCAC ATTTAACGGC AAGTCGACCA CGTACGCCGG CTCGGCACCC 
TATGTGCAAG GAGCGACGTA CGCGTTCAAT GGCATCCACA TGATGATGAC GGGAGCGCCA 
GCCAACGGCG ACACGTTCAA GCTGTCGCCA AATGTCGCCA ACAGCACCGA CAGTGGGAAC 
GCCAGCACGT TGGCCAAGCT ACGCAACGCC TCCCTGCTTG ACGGCGGTAC CGTATCTGTT 
GGTGCGGCTT GGCACAACCT CGTAACGCAG GTGGGCATTC AAGCTCACCA AGCCGCTGGC 
AACTTAACCT CCCAGACGGT GCTGCACAGA AGCGCGGTGT CGCAGCAACA GGCGGTTTCT 
GGTGTGAATC TCGATGAAGA GGCGATGAAA TTGATGCAAT ATCAGAAAGC TTATCAAGCA 
TCGGCAAAAG TCATGCAGAC TGCGAACTCG CTTTTTGATA CCTTGTTATC AATGCACGGC 
CGATAA 

 

Protein sequence

MSSSLLNIGA SGLRTAGIHL QVIGSNIANV NTPGYSRQEV VQTENPPHYG GVGDLGQGAN 
VATVKRIYDQ FLAAQVQSSQ AAASSANQLN SLLSNLSQFM SDRNSGLSSA LTSFFDAADG 
LVSKPSDATA RHVFLGAISG LQSRFNLIAE QASALADQVN SQVQTQIGAV NGAVRQIASL 
NDQIVKAESS AGAPANDLRD QRDQLVQTLN QSIKASSVET SDGQYNIYVG NGQALVQGNR 
SFELTTVPSP YDPSQLSVGY KSPAGTVIVD DAQLGGGALG GLMEFRSKTL IQAQNGVGRL 
AAAISAEVNA QSRLGMDANG KMGGDIFSVA GPSVMPRSDN RGSATLTASI TNATATPAHD 
YQLRYQGGVY TVSRYPDGSK ATVVTTWPAT VDGIRLNLSG TMHSGDSFLV RPTANAAATM 
KVLTTDYRTI AASSAVVADV GGNNRGSGAV TSVGINVVAF PAAAVKLTYN ASAGGSLTGF 
PGSVTVTFNG KSTTYAGSAP YVQGATYAFN GIHMMMTGAP ANGDTFKLSP NVANSTDSGN 
ASTLAKLRNA SLLDGGTVSV GAAWHNLVTQ VGIQAHQAAG NLTSQTVLHR SAVSQQQAVS 
GVNLDEEAMK LMQYQKAYQA SAKVMQTANS LFDTLLSMHG R