Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6492 |
Symbol | |
ID | 8017101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | - |
Start bp | 207686 |
End bp | 208348 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644828282 |
Product | transport secretion system IV protein, VirB1 |
Protein accession | YP_002979482 |
Protein GI | 241554269 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.733642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.924712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTCG CTTTCGTGGA TCTCGCGCAG ACATGCGCGC CCATTGTGGA AGTCAGAACG CTCGCTGCTG TCGTCAGTCT CGAGAGCCGT TTCAAGCCTT TCGCCATTCG GATCAACAGC GGTTCGCCGC TTGAGCGCCA ACCCGCATCG AAGGCGGAAG CAATTGAGCT TGCGACCTCC CTCATTGCGG ATCACCAGAA CATTCAGGTC AGTCTTGGTG GTATCGGCAT GGAGGAGTTG CGCAAGCTGA AGCTTTCGAT TTCGGATGCG TTCGATCCCT GCCTGAACCT CAAGGCCACG GCCACACTGC TCGATAGCTA CTATCGGCTT TCCTTGCGCG CCGGTGCTGA TGCGAGCCAT GCCGAGAACG TCATGCTTCA GTCCTATTAC GGACGGGACG ATCCGTCAGT CGGTAAGATG GTCAAATATG ACAGGCAGGT CCGCCAGGAA ATGGTCCCCC TGTCCTCCAA CCTGGCGTCT GTCGCCATCG CCGAGCCGCG CGAAGAAGTC CCTCTCGAGG AATCGGCTGA TGGCGAGGCG GCGCCAGCAC CCGGAAAATC CCTCTCCCAG CCCGATGAAG CCGCATCGTG GGACGTCTTC AGCGCCCGGC GGCAATCCTC GGTTCTCGTG TTTCAGAATG ATCGATCGGA ACAAAGCAAA TGA
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Protein sequence | MAVAFVDLAQ TCAPIVEVRT LAAVVSLESR FKPFAIRINS GSPLERQPAS KAEAIELATS LIADHQNIQV SLGGIGMEEL RKLKLSISDA FDPCLNLKAT ATLLDSYYRL SLRAGADASH AENVMLQSYY GRDDPSVGKM VKYDRQVRQE MVPLSSNLAS VAIAEPREEV PLEESADGEA APAPGKSLSQ PDEAASWDVF SARRQSSVLV FQNDRSEQSK
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