| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6392 |
|---|
| Symbol | |
|---|
| ID | 8017006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012854 |
|---|
| Strand | - |
|---|
| Start bp | 104250 |
|---|
| End bp | 105158 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644828187 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_002979387 |
|---|
| Protein GI | 241554174 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.612657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA TGCGAATTCT CGATGGCGGC ATGAGCCGCG AACTGTTGCG GCTGGGCGCC
GAGCTGAAAC AACCGGAATG GTCGGCATTG GCGCTGATCA ATGCGCCTGA TATCGTCCGT
AAGGTACACC AGGAATTCAT CGCCGCCGGC TCTGAGGTCG TTACGACAAA CAGCTATGCG
CTCGTGCCCT TTCACATCGG CGAGGATCGG TTCTGGAAGG AAGGGCCAGC GCTGATCCGT
CTCGCCGGTC GCTTGGCGCG CGAGGCGGCC GATGCCGTCA CGGATCGGAA GGTGCTGGTT
GCCGGTTCGC TTCCGCCGAT CTTCGGCTCA TACGAGCCGC AGAATTTTCA GCCTTCACGG
GTGCAGGATT ATCTCGAGGT GCTTGTCGAA AATCTTTCTC CCTTCGTCGA TATATGGCTC
GGTGAGACGT TGAGCCTGAT TGCCGAGGCA GAGGCTGTCC GCAAGGCGGT GGCGACGTCA
GGCAAGCCGC TCTGGATTTC GTTCACCCTG GCAGATAACG AGGTAGCCAT AAGGGGCGGC
GAACCGAAGC TTCGCTCCGA AGAAAGGGTC GAGGACGCGG CATCCTGGGT GGTTTCATCG
GGCGCCGAAG CCCTTTTGTT CAATTGCAGC AAGCCTGAGG TCATGCAGGC GGCCGTGGAG
ACCGCGGCGC GCGTGTTCCG GACAATGGAC GCGCGCATCG AAATCGGCGT CTATGCCAAT
GCCTTCGAAG GGGAGCAAGG CGAGGCAGCC GCCAATGAAG GCCTGCATAA GACCCGCAAC
GACCTAAATG ACGATGCCTA CTCGCGCTAT GCCTGCTCCT GGGCTGAGGC CGGCGCGACC
ATCATCGGCG GCTGCTGCGG CATTGGCGCC GCCCATATCC ATCGCCTGAA GAAGACGCTT
TTGGATTGA
|
|---|
| Protein sequence | MSTMRILDGG MSRELLRLGA ELKQPEWSAL ALINAPDIVR KVHQEFIAAG SEVVTTNSYA
LVPFHIGEDR FWKEGPALIR LAGRLAREAA DAVTDRKVLV AGSLPPIFGS YEPQNFQPSR
VQDYLEVLVE NLSPFVDIWL GETLSLIAEA EAVRKAVATS GKPLWISFTL ADNEVAIRGG
EPKLRSEERV EDAASWVVSS GAEALLFNCS KPEVMQAAVE TAARVFRTMD ARIEIGVYAN
AFEGEQGEAA ANEGLHKTRN DLNDDAYSRY ACSWAEAGAT IIGGCCGIGA AHIHRLKKTL
LD
|
|---|
| |