| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5667 |
|---|
| Symbol | |
|---|
| ID | 8016893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012853 |
|---|
| Strand | + |
|---|
| Start bp | 245287 |
|---|
| End bp | 246189 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644827821 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002979021 |
|---|
| Protein GI | 241518393 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.561137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCA AGCGCAATGA AATTCACGAG CTGTCGATCT TTCTCGCGAT AGTCCAATAC
CGTAGTTTTC GCAAAGCGGC GGATCACCTA GAAGTAACAG CTTCCGCCCT GAGCCACAGC
ATGAAGGCGC TTGAGCAAAG GCTGGGCGTG CGCCTCCTTA ATCGAACCAG CCGCAGCGTT
GCACCAACCG CCGCCGGAAC AGCCCTCGCC GAGAAGATCT CTGCCGGGCT CGAGCTTATC
AACTCCGGAT TGGAGGACTT GAACGGACAT TATCAAGGTG GCGCCGGCAG CATTCGCATC
AATGTTCTGA AAGATGCCGC CGTTCTGCTT TTGCGGCCAG CCATTCCGGT GTTCCAGCAA
CGCTTCCCGA ATGTCGAGCT TGAGGTCGCC GTGGATGACC AGTTCATCGA TGTCACCGCG
GACGGGTTCG ATGCCGGTAT CCGGTACAGC GGCACCATCC CGGAAGACAT GATCGCAGTT
CCTCTCACTC CTCCTTTAAA GTGGGTCGCG GTTGCTGCCC CTGATTATCT CAGAAGTCAT
GGTCGCCCTG TCATGCCGGA GGACCTCAAT TCCCACCACT GCATCCGGAT ACGGACGGGC
CGCGGCCAGA TCTACAAGTG GGAATTCGAA CGCGGCGATG ACCGGCGCGA GATCGACGTT
CCCGGAGCGC TGATATCAGG CGAAACCGAT CTTGCCATCA ATGCGGCTCT GGAAGGCGCC
GGGTTGTGCT ATTGCCTGGA ACGGTTGGCA AGCCCCTACG TTTCCGCAGG CCGCCTGGAA
GTCGTCCTTC CCAAATGGGC GTCGATGGGC CCGCCGTTTT CGATGTATTA TTCCAGCCGG
CGGCAGCTTC CCTTCGGCGT CGACGCGCTG ATCAAGATCG TTCGCGGCTT GAACGGATTT
TAG
|
|---|
| Protein sequence | MQFKRNEIHE LSIFLAIVQY RSFRKAADHL EVTASALSHS MKALEQRLGV RLLNRTSRSV
APTAAGTALA EKISAGLELI NSGLEDLNGH YQGGAGSIRI NVLKDAAVLL LRPAIPVFQQ
RFPNVELEVA VDDQFIDVTA DGFDAGIRYS GTIPEDMIAV PLTPPLKWVA VAAPDYLRSH
GRPVMPEDLN SHHCIRIRTG RGQIYKWEFE RGDDRREIDV PGALISGETD LAINAALEGA
GLCYCLERLA SPYVSAGRLE VVLPKWASMG PPFSMYYSSR RQLPFGVDAL IKIVRGLNGF
|
|---|
| |