Gene Rleg_5537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5537 
Symbol 
ID8016428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp124256 
End bp124975 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content65% 
IMG OID644827704 
ProductABC transporter related 
Protein accessionYP_002978904 
Protein GI241518276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0407742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000719061 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCTGC TCGAAACCAG AGGCCTGACC GCCTCCTACG GCGGTTTCCA GGCGCTGTTC 
GGCGTCGATA TTGTGGTCGG CGCCGGCGAG ACCGTCGCCA TCATTGGCGC CAACGGCGCC
GGCAAGACGA CGCTGATGCG CTCGATCTCA GGCGTGCTCA CCAATGCGGC GTCATCGATC
CTTTATCGCG ACGAGCCGAT CGGCGCGCTG TCGGCGCCTG ACATTCTGGC GCGCGGCATC
GCCATGGTGC CGGAAGGGCG AAAACTCTTT CCGTCGCTGA GCGTCGAGGA AAACCTGCTG
GTCGGCAATT ATGGCCGCAA GGTCGATGGC CCGTGGACGC TCGAAAGCAT CTTCGCGCTA
TTCCCAATCC TGAAGGAGCG GCGCGACAAT CCGGCCACGG CGCTTTCCGG CGGGCAGCAG
CAGATGGTGG CGATCGGCCG CGGGCTGATG TCCAATCCGG CGATGCTGCT CTGTGACGAG
ATCAGCCTTG GCCTTGCGCC CGTCGTGGTC CGCGATATCT ACGCCGCCTT CCCGCGCATC
CGCGAGACCG GCGCTTCGAT CGTCATCGTC GAGCAGGATA TCGCCCAGGC GCTGAAGGTG
GCCGACCGCG TCTACTGCAT GATGGAAGGG CGGGTAACGC TTTCCGGCCG CGCCGCCGAC
CTCAGCCGCG ACGACATCCA CAAGGCTTAT TTCGGGACGG ATCACCATGA ACTGGCTTGA
 
Protein sequence
MALLETRGLT ASYGGFQALF GVDIVVGAGE TVAIIGANGA GKTTLMRSIS GVLTNAASSI 
LYRDEPIGAL SAPDILARGI AMVPEGRKLF PSLSVEENLL VGNYGRKVDG PWTLESIFAL
FPILKERRDN PATALSGGQQ QMVAIGRGLM SNPAMLLCDE ISLGLAPVVV RDIYAAFPRI
RETGASIVIV EQDIAQALKV ADRVYCMMEG RVTLSGRAAD LSRDDIHKAY FGTDHHELA