| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5513 |
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| Symbol | |
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| ID | 8016404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012853 |
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| Strand | - |
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| Start bp | 98682 |
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| End bp | 99248 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644827680 |
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| Product | conjugal transfer pilin processing protease TraF |
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| Protein accession | YP_002978880 |
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| Protein GI | 241518252 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0619893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCCGA CAATCAGGCG CCAGTGCCCG ACACACGAAA AAATTCACCC CGCCGCGACG
CTATTATTGG CCGCGGCCTT GCTGGCGTTT GTCTTGTCCG TCGCCGCCGC CGCCGGTGGG
TTCCGCATCA ATATGACACC AAGCGAACCG CTCGGCCTCT GGCGGGTCGC AGCACTCGAT
CGGTCCCCCG CGGTCGGCGA TGTCGTCTTC ATCTGCCCGC CGGAAAACGA CAGGATGCGC
GAGGCCCGAC AGCGCGGCTA TCTGCGCTCC GGTTCGTGCC CGGGCGGTTT TGCCCCGCTG
ATCAAAACGG TGATCGCCAC CGAGGGTCAA AGGGTGGAGA TCAGGTCAGC CATGTTCGTC
GATGGCATCA CCGTGGCAAA TTCGGCAGTC GCCAGAGCAG ATGGAAAAGG TCGAGCTCTT
TCGGCTTTTG CAAGTGGCAC CGTGCCAGCT GGACACGCCG TTCTGCATTC CGGTTTCGCG
GGCTCCTACG ATTCCCGCTA TTTCGGTCCT TTACCCGTGT CCGGCATCCT CGGTCTGGCG
CAAAAGGTGC TCACCTATGC GCCGTGA
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| Protein sequence | MIPTIRRQCP THEKIHPAAT LLLAAALLAF VLSVAAAAGG FRINMTPSEP LGLWRVAALD
RSPAVGDVVF ICPPENDRMR EARQRGYLRS GSCPGGFAPL IKTVIATEGQ RVEIRSAMFV
DGITVANSAV ARADGKGRAL SAFASGTVPA GHAVLHSGFA GSYDSRYFGP LPVSGILGLA
QKVLTYAP
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