| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6218 |
|---|
| Symbol | |
|---|
| ID | 8016230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | + |
|---|
| Start bp | 272750 |
|---|
| End bp | 274258 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644827523 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002978723 |
|---|
| Protein GI | 241258839 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.145778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.14041 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTGC GCATGATCCC AGCCAGTGGG CAGACTTATA CCCAGATCCT CAAGTCGACG
ATGCTGATGG GCGGTTCCTC GCTCGTGAAC GTCGCTTTAA GCATCATTCG CAACAAGGCC
CTGGCCGTTC TGCTTGGGCC TGAAGGCGTG GGGCTCATGG GCCTCTACCA GTCAATCGTC
GATATCGCGC AAACGGCCGC TGGCCTGGGA CTGGGCGGCA GCGGGGTGCG ACAGGTCGCC
GAGGCCGCCG GTACCGGCGA CGAAGCGAGG ATCGCACAGT CGGCGAAGGC GTTGAGACGC
ATATCGATAG TACTCGGGGT GGTTGGCGCG CTCCTTCTTG CGGCGCTGGC ATTTCCCGTC
TCGGGGTTCA CCTTCGGCGC CTACCAGCAC GCCGGTGGCA TCGCACTGCT CTCGCTCGCC
GTATTTTTCC GGATAGTGTC GTCCGGGCAG ACGGCGTTGA TCCAGGGCTT ACGTGGCATT
GCAAATCTTG CCCGCATCAA TGTGCTCACA GGTTTTTTCG GCACGGTTAT CACGGTCCCG
CTGATTTACC TGTTCGGCGC GCAGGCGATC GCACCCTCCG TCGTAGCGAT TGCGGCCGTC
ACAACACTCT CCACCTGGTG GTACAGCAGA CGGATAGGCG CACACTCGCC GCGAATGTCG
GCTCGCCAAT TTGGCCAAGA GTGGGCACCT CTGCTGAGAT TTGGCGCCGT GTTCATGGCG
AGCGGACTTC TAACCTTCGG CGCGGCCTAT GCCATCCGCA TCATCATATT GAAGGATGGG
GGCGTGATGG CCGCAGGATT GTATCAGGCA GCCTGGGGGT TGGGCGGTCT CTATGCCGGC
TTCATTTTGC AGGCGATGGG AACGGACTTC TATCCGCGCC TGACCACGAC TGCGGATAAT
CATGCCGAAT GCAACCGCCT GGTTAACGAA CAGATGGAAA TCAGCATCCT TCTTGCCGGC
CCCGGTCTGC TCGCCACTTT GACGTTGGCG CCGCTCATGA TGAGCCTATT CTATTCTTCG
GAGTTTCATG GCGCGGTTGA TCTCTTGCGC TGGATCTGCC TTGGCATGAT GCTCAGGATC
ATCGCGTGGC CGATGGGTTT CATCATCCTG GCGAAGCGTG CACAATCCAT TTTCTTCTGG
ACGGAGGTGG CGGCCACGCT CGTGCATGTA GGGCTGGCAT GGCACTTCGT ATCGAAGTTC
GGTACGCCAG GAGCCGGCAT GGCGTTTTTC GGCCTCTACG TCTGGCATAG CATCCTCATT
TACGTGATCG TGCGGCGGCT TACCGGCTTC CGCGGATCCG CAGCCAACCG CAGGCACGTG
CTGCTTTTCC TGCCTGCATC GGTGCTGGTA TTCTCGGCGT TTTGGGTCTT GCCGTTATGG
CCGGCGATAG GGATCGGCAC CTTGGCCGTA GCTCTGACTG GGATCTACTC GCTGCGCATG
CTGGTCCAGC TTCTTCCGCC CGAAGTGATG CCTGCAGTGA TCAGAGGATG GATCGCGAAG
TTCGCCTAG
|
|---|
| Protein sequence | MTLRMIPASG QTYTQILKST MLMGGSSLVN VALSIIRNKA LAVLLGPEGV GLMGLYQSIV
DIAQTAAGLG LGGSGVRQVA EAAGTGDEAR IAQSAKALRR ISIVLGVVGA LLLAALAFPV
SGFTFGAYQH AGGIALLSLA VFFRIVSSGQ TALIQGLRGI ANLARINVLT GFFGTVITVP
LIYLFGAQAI APSVVAIAAV TTLSTWWYSR RIGAHSPRMS ARQFGQEWAP LLRFGAVFMA
SGLLTFGAAY AIRIIILKDG GVMAAGLYQA AWGLGGLYAG FILQAMGTDF YPRLTTTADN
HAECNRLVNE QMEISILLAG PGLLATLTLA PLMMSLFYSS EFHGAVDLLR WICLGMMLRI
IAWPMGFIIL AKRAQSIFFW TEVAATLVHV GLAWHFVSKF GTPGAGMAFF GLYVWHSILI
YVIVRRLTGF RGSAANRRHV LLFLPASVLV FSAFWVLPLW PAIGIGTLAV ALTGIYSLRM
LVQLLPPEVM PAVIRGWIAK FA
|
|---|
| |