Gene Rleg_6216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6216 
Symbol 
ID8016228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp265446 
End bp270632 
Gene Length5187 bp 
Protein Length1728 aa 
Translation table11 
GC content62% 
IMG OID644827521 
Productouter membrane adhesin like proteiin 
Protein accessionYP_002978721 
Protein GI241258837 
COG category 
COG ID 
TIGRFAM ID[TIGR01965] VCBS repeat 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0355107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0464168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCA ACGCTCGCCG GTGGACATCA CGCTCACTCC TGCTGGATTC GTTGGTTCCC 
CGATGGCTGA CCGTCGGCGG AAAGGGAAGG CCTGGCAAGC CTGCCGATAA GCGCGAGGAT
AGTGCTCAAC TTGCGACATC CGTGCAGACG GCCGATGGAA ACAAGCATGA TGGTACGCTT
GTCGACAATC CCTACAACAA CGCGGCGCTC AACGAGCACG ATGTTGGTCC GAGTGGGGGC
GTGATTGGCG ACGCGGAAGG TGGGGTGGAT ATCAACCACC TAGCGCTGCC CTTGCCTGCC
CTGCCTGACG CTTTCACAGC AAATCGCGAG ACAGGGGTTC GAAGCGGGGA CACTGCCGCG
TCTCGGTTGT TCGCCCACAC GCCTGGTTTT GCAAGTTTCG AGCGGGACGC GCACGGTGTC
GCATTCGGGG CTCAATCGTC CCTTTATCGC ACCTACGCTG GAATGAGCCT CATAGGCGAC
GATCCTTTGG CTCCGTATCT GTCGCAAAGC TCTTCACCGA TAGTTTCGGG ACAGGGTTCT
GCCGCGGTGA CGGGCGAGCG TGCGCACTCG GGCAACGTCG TCATCCTCGA ATCGAGCCCG
TCAGCGCAGG CGACCGCGCA GCATGATGGA GTTAACTCGC TGGCTTTTGG CATGCCCTTT
GGTGTGTGCG GATGCGGTTA TTTTACCTCT CCTACGCGGA TTCTCGATTG GGCCCATGGC
GGCGCCGTGC TCCAACAGGA CGGTCAATTA CCGGGAACCA GGCTGACCGA GGGGCCGGAC
TTTGTATCGA CGATCAAGCG GGCCATCGGC GCCTCGATCA GCGACCCGCT TCTCGATCGT
AACCTTTCCC CTCTCTCGGG CTGGCGCGGG ACCGCAACAT GGACGGATTC GCCGATCTTG
AACGGATCGT TGCCAGGCGG CGGAGAAATC GGAACGGGCA CCGCCACATC CAAGGGTATC
GGCACTCTTT CCGGCTCGGT GACGACGCCA CCTTCAACGC AGCGGTCGTT GACGACGCAA
AATCTGGCGG CCGCGGCTGC GGCAAGCAAC CTGATCGTGC TGGAAAATCA GAAGCAGGGT
AACCCAGAGA GCGAGTGGGG CATCGACGGT GCCGGTAGCT CCAACATCGA GGGATTTGCG
ACCGACATCA GCGTCGACAA TGGCAAGACG ATCAGCTTCA AGATCAATAC GAATTCCACC
AACTATCGGA TCGATATATA CCGGCTCGGC TATTATGGCG GCATGGGCGC GCGCAAGGTC
GACACCATTC AGCATACCGG ATTGCAGAAT CAACCTAATC CGTTGCGCAA TGCGACGACC
GGCACGGTCG ATGCCGGCAA TTGGGCCGTG TCGGCCTCGT GGACCGCACC CGAGGACGCC
GTATCAGGCG TCTATATCGC CAAGCTCGTG CGTCAGGATG GCACCTCCGG CGAAAATCAC
ATCCCGTTCA TCGTGCGCGA CGACGACAGC CACAGCGACA TCGTCTTTCA GACGGCAGAC
CAGACCTGGC AAGCTTACAA CGGTTGGGGT GGCGCAAACC TCTATGGCGG CAACGGTCCG
GCGACGGGGC AGGGTGCGGG TCGCGCCTAT GCGGTCAGCT ACAACAGACC GATCGCGACC
CGCGGCGGGG TTGGCACTTT TGCCGGTCCG CAGGATTATC TGTTCGGCGC CGAATATGCG
GGCATCTACT GGCTGGAACA GAACGGCTAT GACGTCTCCT ACCTGTCGGG TGTCGACGCC
GACCGCTATG GCAGCCTGTT GCTCAATCAC AAGACCTATG TTGATGCTGG GCATGACGAA
TACTGGTCTG GTCAGCAGCG GACCAATGTC GAAGCAGCGC GCGATGCGGG CGTCAACCTG
ATGTTCTGGA GCGGTAACGA GGTCTATTGG CGCACCCGTT GGGGCAATGC CTATAGCGCC
GACGGCACGC CCTATCGCAC TCTGATCACC TATAAGGAGA CATTTTCGCC CGGCGCGAGC
ATCGACCCTT CGAACGAATG GACAGGCACA TTCCGTGATC CGCGCCTCAG CCCACCCGCC
GTCGGCGGTG GAAACCCGGA AAACTCACTG ACCGGACAGT TGTTCAAGGT CGATGATGTC
GGCAGCAATC TCGCCGCCAT CACGGTCGGA TATGACGACG CCAACCTGCG CTTCTGGCGC
AATACGAGTG TTGCCAATCT TCAGCCTGGC CAGACCGCAA CGCTCACCAA AAACTATCTT
GGTTACGAAT GGGACGAAGC GGTCGATAAC GGCTTCGATC CGGCTGGCCT TGTCAAGCTG
TCGTCGACGA CGCTTCCGGT CAGCACCTAC TTGCTTGACT ACGGAAATAC CACCGGCAAT
GCGACGTCGA CCCACAATTT GACGCTCTAT CGTGCGCCGA GCGGTGCACT GGTGTTCGGC
GCCGGTACCG TGTACTGGAC ATGGGGCCTG AGCGACAATC ACGACAACCA GGCGACTCCG
ACCGATCCCC GCGTACAGCA GGCAATGGTC AATCTGCTTG CCGATATGGG CATTCAGCCT
GGGACGCTGC AATCCGGGCT TGTCGCTACA ACCGGTTCCA CGGACCATGT TGCACCGACC
TCCGTCATCA CGGTGCCCGC GACGGTGGCC GTCGGATCCA ACGTGACGAT TACGGGCACT
GCTGCCGACA CGGGCGGCGG GGTGGTCGCC AGCGTGGAGG TTTCGACCGA CAACGGCGCG
AGCTGGCATC CAGCGACAGG CGATGAGAAC TGGACCTATA GCTGGTCGCC GCAGGTCGCC
GGTAGCTACA CGATCCGGTC CCGCGCCGTC GACGACAACA TCAACCTTGA AACACCCTCC
GCCGGGCGAA CGGTCACCGT CAGCGGACCG AGTTACACGT CTCTGTTCGG TTCGGCGACG
CCAGCGGTCG TCAACACCGA CGATACCTCA GCCGTTGAAC TCGGGGTCAA ATTCCAGACC
TCTGTGGCAG GGACCGTCAC CGGGATTCGC TTCTACAAGG GCAGCCAGGA TACGGGCACG
CACACCGGTT CTTTATGGTC GAGCACCGGT ACGCGGCTTG CGACCCTCAC CTTCACCAAC
GAGACCGCCA GCGGCTGGCA GATCGCCTAT TTCACCAGTC CGGTGGCGCT GACGGCCGGA
CAAACCTATA CAGCGTCTTA CCACACGAAT ACCGGTCACT ATTCGACAAC CGCCGACTAC
TTCATCTCCA ATGTGACGAG TGGGCCTCTG ACGGCGCCGG CCAGCGGCAA CGGCGTATAC
ACCTATGGCA GCGCCAGCCT CTTCCCCACA GGCACATTCC AGTCGACGAA CTATTGGGTC
GATGTGATGT TTAGCACGTC GGGATCGAAC ACGACGCCGA CGGCAGTTGC CGATGCGGGG
GATGCGACCG AGAAGGGTGG CGTGGGCAAC GGTTCGGGTG GTGTGGTTGC CAGCGGCAAT
GTGCTGACCA ACGATACCGA TACGGATGCC GGTGACACCA AGACGGTGAC GGCGATCCGC
TTCGGCGCCA CAACCGGCAC GCTCGGTTCG GCACTGAACG GCACCTATGG CAGTCTCGTG
CTCAGCGCAT CGGGCGTCTA TAGCTATGCC GTCAACGAGA CCAATGCCGC CGTGCAGGCA
TTGCGGCAGT CGACCAACAC GCTGAGCGAT GTCTTCAGCT ATACGATGCG TGACACGGCC
GGCGCCACCG CCACGGCCAG CCTCACCGTC ACCATCCATG GCGCCAACGA CGCGCCGGTG
CTGGCGGTCC AGACGGCTAG CCAGAACGCC ACCGTCGGCT CTGCCTTCTC GTTCACGCTG
CCGACGACGA CCTTCACCGA TGTCGACAGC GGCGAGACGC TGGCCTATGC GGCAACGTCC
GCCGACGGCA CGGCGCTGCC TGGCTGGCTG AGCTTCAATG CCTCGACGAG GACCTTCTCC
GGAACGGCGA CGACATCAGG TACCTATGGC GTCAGGGTCA CGACGACCGA CCTTGGCGGC
CTCACCGCCA CTGAGACCTT CAACATCGCC GTGTCGACAT CAGGCAACAC GACGCCGACG
GCGGTTGCCG ATGCCGGGGA TGCGACCGAG AAGGGTGGCG TGGGCAACGG TTCGGGCGGC
GTTGTTGCCA GCGGCAACGT GCTGACCAAC GACACCGATG CGGATGCCGG TGACACCAAG
GCGGTGACCG CAGTCGGCTT CGGCGCGACA TCAGGCACGC TCGGTTCGGC GCTGAACGGC
GCCTATGGCA GTCTCGTGCT CAGTGCATCG GGCGTCTATA GTTATGCCGT CAACGAGACC
AATGCCGCCG TGCAGGCATT GCGGCAGTCG ACCAACACGC TGAGCGAAGT CTTCAGCTAC
ACGATGCGCG ACACTGCCGG CGCCACCGCC ACGGCCAACC TGACCGTCAC CATCCATGGC
GCCAATGACG CGCCGGTGCT GGCTGTTCAG ACGGCTGCCC AGAACGCCAG CGTCGGCACA
GCCTTCTCCT TTGTCCTGCC GACAACGACC TTCACCGATG TCGACAGCGG TGAAACGCTG
ACCTACACGG CAACGGCTGC CGACGGCACG GCACTGCCTG CCTGGCTCGC CTTCAACGCC
ACGACGCGGA CCTTCAGCGG CACACCGACG ACATCCGGCA CCTATGGCGT CAGGGTGACG
GCAACCGACC TCGGCGGCCT TGCCGCCAAC GAGACCTTCA ATATCACTGC GACAGTGGCG
CCTGCGACCT ACAGCCTGTT CAACGCCTCC AGCACACCGG CCCAGACCAA CCTCAACGAC
GGTCAGCAGC TCGAGGTCGG CGTCAAGTTC CAGTCGAACG TTATCGGTGA TGTCACCGCC
ATCAAGTTCT ACCGCAACGC CAACGACAAC GGACAGAACG TCGTCGATCT GTGGACCACG
ACCGGCACCA AGCTTGCCAC CGCCACCTTC ACCAACACCA CGGCGAGCGG CTGGCAGACG
GTGAACTTCA CAACGCCCGT CACCATCGCC GCCAACACCA CCTATATCGC CTCCTACCAC
ACCACCGGTG CATACGTGGC TACCGATGGC TTCTTCGCCA ACGGCGTCAG CAACGGTCCG
CTGTCGGCGC TATCCAGCGC TGCGGCTGGC GGCAATGGCG TCTATGCCTA CGGCGGATCT
GCCACCACAG GTCTCTTCCC GACCAGCACC TTTGACTCGG CAAACTATTA TGCCGATGTG
GTCTTCCGGC CGCAGCTTGC AGCTTGA
 
Protein sequence
MYRNARRWTS RSLLLDSLVP RWLTVGGKGR PGKPADKRED SAQLATSVQT ADGNKHDGTL 
VDNPYNNAAL NEHDVGPSGG VIGDAEGGVD INHLALPLPA LPDAFTANRE TGVRSGDTAA
SRLFAHTPGF ASFERDAHGV AFGAQSSLYR TYAGMSLIGD DPLAPYLSQS SSPIVSGQGS
AAVTGERAHS GNVVILESSP SAQATAQHDG VNSLAFGMPF GVCGCGYFTS PTRILDWAHG
GAVLQQDGQL PGTRLTEGPD FVSTIKRAIG ASISDPLLDR NLSPLSGWRG TATWTDSPIL
NGSLPGGGEI GTGTATSKGI GTLSGSVTTP PSTQRSLTTQ NLAAAAAASN LIVLENQKQG
NPESEWGIDG AGSSNIEGFA TDISVDNGKT ISFKINTNST NYRIDIYRLG YYGGMGARKV
DTIQHTGLQN QPNPLRNATT GTVDAGNWAV SASWTAPEDA VSGVYIAKLV RQDGTSGENH
IPFIVRDDDS HSDIVFQTAD QTWQAYNGWG GANLYGGNGP ATGQGAGRAY AVSYNRPIAT
RGGVGTFAGP QDYLFGAEYA GIYWLEQNGY DVSYLSGVDA DRYGSLLLNH KTYVDAGHDE
YWSGQQRTNV EAARDAGVNL MFWSGNEVYW RTRWGNAYSA DGTPYRTLIT YKETFSPGAS
IDPSNEWTGT FRDPRLSPPA VGGGNPENSL TGQLFKVDDV GSNLAAITVG YDDANLRFWR
NTSVANLQPG QTATLTKNYL GYEWDEAVDN GFDPAGLVKL SSTTLPVSTY LLDYGNTTGN
ATSTHNLTLY RAPSGALVFG AGTVYWTWGL SDNHDNQATP TDPRVQQAMV NLLADMGIQP
GTLQSGLVAT TGSTDHVAPT SVITVPATVA VGSNVTITGT AADTGGGVVA SVEVSTDNGA
SWHPATGDEN WTYSWSPQVA GSYTIRSRAV DDNINLETPS AGRTVTVSGP SYTSLFGSAT
PAVVNTDDTS AVELGVKFQT SVAGTVTGIR FYKGSQDTGT HTGSLWSSTG TRLATLTFTN
ETASGWQIAY FTSPVALTAG QTYTASYHTN TGHYSTTADY FISNVTSGPL TAPASGNGVY
TYGSASLFPT GTFQSTNYWV DVMFSTSGSN TTPTAVADAG DATEKGGVGN GSGGVVASGN
VLTNDTDTDA GDTKTVTAIR FGATTGTLGS ALNGTYGSLV LSASGVYSYA VNETNAAVQA
LRQSTNTLSD VFSYTMRDTA GATATASLTV TIHGANDAPV LAVQTASQNA TVGSAFSFTL
PTTTFTDVDS GETLAYAATS ADGTALPGWL SFNASTRTFS GTATTSGTYG VRVTTTDLGG
LTATETFNIA VSTSGNTTPT AVADAGDATE KGGVGNGSGG VVASGNVLTN DTDADAGDTK
AVTAVGFGAT SGTLGSALNG AYGSLVLSAS GVYSYAVNET NAAVQALRQS TNTLSEVFSY
TMRDTAGATA TANLTVTIHG ANDAPVLAVQ TAAQNASVGT AFSFVLPTTT FTDVDSGETL
TYTATAADGT ALPAWLAFNA TTRTFSGTPT TSGTYGVRVT ATDLGGLAAN ETFNITATVA
PATYSLFNAS STPAQTNLND GQQLEVGVKF QSNVIGDVTA IKFYRNANDN GQNVVDLWTT
TGTKLATATF TNTTASGWQT VNFTTPVTIA ANTTYIASYH TTGAYVATDG FFANGVSNGP
LSALSSAAAG GNGVYAYGGS ATTGLFPTST FDSANYYADV VFRPQLAA