Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6216 |
Symbol | |
ID | 8016228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 265446 |
End bp | 270632 |
Gene Length | 5187 bp |
Protein Length | 1728 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644827521 |
Product | outer membrane adhesin like proteiin |
Protein accession | YP_002978721 |
Protein GI | 241258837 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01965] VCBS repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0355107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0464168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGCA ACGCTCGCCG GTGGACATCA CGCTCACTCC TGCTGGATTC GTTGGTTCCC CGATGGCTGA CCGTCGGCGG AAAGGGAAGG CCTGGCAAGC CTGCCGATAA GCGCGAGGAT AGTGCTCAAC TTGCGACATC CGTGCAGACG GCCGATGGAA ACAAGCATGA TGGTACGCTT GTCGACAATC CCTACAACAA CGCGGCGCTC AACGAGCACG ATGTTGGTCC GAGTGGGGGC GTGATTGGCG ACGCGGAAGG TGGGGTGGAT ATCAACCACC TAGCGCTGCC CTTGCCTGCC CTGCCTGACG CTTTCACAGC AAATCGCGAG ACAGGGGTTC GAAGCGGGGA CACTGCCGCG TCTCGGTTGT TCGCCCACAC GCCTGGTTTT GCAAGTTTCG AGCGGGACGC GCACGGTGTC GCATTCGGGG CTCAATCGTC CCTTTATCGC ACCTACGCTG GAATGAGCCT CATAGGCGAC GATCCTTTGG CTCCGTATCT GTCGCAAAGC TCTTCACCGA TAGTTTCGGG ACAGGGTTCT GCCGCGGTGA CGGGCGAGCG TGCGCACTCG GGCAACGTCG TCATCCTCGA ATCGAGCCCG TCAGCGCAGG CGACCGCGCA GCATGATGGA GTTAACTCGC TGGCTTTTGG CATGCCCTTT GGTGTGTGCG GATGCGGTTA TTTTACCTCT CCTACGCGGA TTCTCGATTG GGCCCATGGC GGCGCCGTGC TCCAACAGGA CGGTCAATTA CCGGGAACCA GGCTGACCGA GGGGCCGGAC TTTGTATCGA CGATCAAGCG GGCCATCGGC GCCTCGATCA GCGACCCGCT TCTCGATCGT AACCTTTCCC CTCTCTCGGG CTGGCGCGGG ACCGCAACAT GGACGGATTC GCCGATCTTG AACGGATCGT TGCCAGGCGG CGGAGAAATC GGAACGGGCA CCGCCACATC CAAGGGTATC GGCACTCTTT CCGGCTCGGT GACGACGCCA CCTTCAACGC AGCGGTCGTT GACGACGCAA AATCTGGCGG CCGCGGCTGC GGCAAGCAAC CTGATCGTGC TGGAAAATCA GAAGCAGGGT AACCCAGAGA GCGAGTGGGG CATCGACGGT GCCGGTAGCT CCAACATCGA GGGATTTGCG ACCGACATCA GCGTCGACAA TGGCAAGACG ATCAGCTTCA AGATCAATAC GAATTCCACC AACTATCGGA TCGATATATA CCGGCTCGGC TATTATGGCG GCATGGGCGC GCGCAAGGTC GACACCATTC AGCATACCGG ATTGCAGAAT CAACCTAATC CGTTGCGCAA TGCGACGACC GGCACGGTCG ATGCCGGCAA TTGGGCCGTG TCGGCCTCGT GGACCGCACC CGAGGACGCC GTATCAGGCG TCTATATCGC CAAGCTCGTG CGTCAGGATG GCACCTCCGG CGAAAATCAC ATCCCGTTCA TCGTGCGCGA CGACGACAGC CACAGCGACA TCGTCTTTCA GACGGCAGAC CAGACCTGGC AAGCTTACAA CGGTTGGGGT GGCGCAAACC TCTATGGCGG CAACGGTCCG GCGACGGGGC AGGGTGCGGG TCGCGCCTAT GCGGTCAGCT ACAACAGACC GATCGCGACC CGCGGCGGGG TTGGCACTTT TGCCGGTCCG CAGGATTATC TGTTCGGCGC CGAATATGCG GGCATCTACT GGCTGGAACA GAACGGCTAT GACGTCTCCT ACCTGTCGGG TGTCGACGCC GACCGCTATG GCAGCCTGTT GCTCAATCAC AAGACCTATG TTGATGCTGG GCATGACGAA TACTGGTCTG GTCAGCAGCG GACCAATGTC GAAGCAGCGC GCGATGCGGG CGTCAACCTG ATGTTCTGGA GCGGTAACGA GGTCTATTGG CGCACCCGTT GGGGCAATGC CTATAGCGCC GACGGCACGC CCTATCGCAC TCTGATCACC TATAAGGAGA CATTTTCGCC CGGCGCGAGC ATCGACCCTT CGAACGAATG GACAGGCACA TTCCGTGATC CGCGCCTCAG CCCACCCGCC GTCGGCGGTG GAAACCCGGA AAACTCACTG ACCGGACAGT TGTTCAAGGT CGATGATGTC GGCAGCAATC TCGCCGCCAT CACGGTCGGA TATGACGACG CCAACCTGCG CTTCTGGCGC AATACGAGTG TTGCCAATCT TCAGCCTGGC CAGACCGCAA CGCTCACCAA AAACTATCTT GGTTACGAAT GGGACGAAGC GGTCGATAAC GGCTTCGATC CGGCTGGCCT TGTCAAGCTG TCGTCGACGA CGCTTCCGGT CAGCACCTAC TTGCTTGACT ACGGAAATAC CACCGGCAAT GCGACGTCGA CCCACAATTT GACGCTCTAT CGTGCGCCGA GCGGTGCACT GGTGTTCGGC GCCGGTACCG TGTACTGGAC ATGGGGCCTG AGCGACAATC ACGACAACCA GGCGACTCCG ACCGATCCCC GCGTACAGCA GGCAATGGTC AATCTGCTTG CCGATATGGG CATTCAGCCT GGGACGCTGC AATCCGGGCT TGTCGCTACA ACCGGTTCCA CGGACCATGT TGCACCGACC TCCGTCATCA CGGTGCCCGC GACGGTGGCC GTCGGATCCA ACGTGACGAT TACGGGCACT GCTGCCGACA CGGGCGGCGG GGTGGTCGCC AGCGTGGAGG TTTCGACCGA CAACGGCGCG AGCTGGCATC CAGCGACAGG CGATGAGAAC TGGACCTATA GCTGGTCGCC GCAGGTCGCC GGTAGCTACA CGATCCGGTC CCGCGCCGTC GACGACAACA TCAACCTTGA AACACCCTCC GCCGGGCGAA CGGTCACCGT CAGCGGACCG AGTTACACGT CTCTGTTCGG TTCGGCGACG CCAGCGGTCG TCAACACCGA CGATACCTCA GCCGTTGAAC TCGGGGTCAA ATTCCAGACC TCTGTGGCAG GGACCGTCAC CGGGATTCGC TTCTACAAGG GCAGCCAGGA TACGGGCACG CACACCGGTT CTTTATGGTC GAGCACCGGT ACGCGGCTTG CGACCCTCAC CTTCACCAAC GAGACCGCCA GCGGCTGGCA GATCGCCTAT TTCACCAGTC CGGTGGCGCT GACGGCCGGA CAAACCTATA CAGCGTCTTA CCACACGAAT ACCGGTCACT ATTCGACAAC CGCCGACTAC TTCATCTCCA ATGTGACGAG TGGGCCTCTG ACGGCGCCGG CCAGCGGCAA CGGCGTATAC ACCTATGGCA GCGCCAGCCT CTTCCCCACA GGCACATTCC AGTCGACGAA CTATTGGGTC GATGTGATGT TTAGCACGTC GGGATCGAAC ACGACGCCGA CGGCAGTTGC CGATGCGGGG GATGCGACCG AGAAGGGTGG CGTGGGCAAC GGTTCGGGTG GTGTGGTTGC CAGCGGCAAT GTGCTGACCA ACGATACCGA TACGGATGCC GGTGACACCA AGACGGTGAC GGCGATCCGC TTCGGCGCCA CAACCGGCAC GCTCGGTTCG GCACTGAACG GCACCTATGG CAGTCTCGTG CTCAGCGCAT CGGGCGTCTA TAGCTATGCC GTCAACGAGA CCAATGCCGC CGTGCAGGCA TTGCGGCAGT CGACCAACAC GCTGAGCGAT GTCTTCAGCT ATACGATGCG TGACACGGCC GGCGCCACCG CCACGGCCAG CCTCACCGTC ACCATCCATG GCGCCAACGA CGCGCCGGTG CTGGCGGTCC AGACGGCTAG CCAGAACGCC ACCGTCGGCT CTGCCTTCTC GTTCACGCTG CCGACGACGA CCTTCACCGA TGTCGACAGC GGCGAGACGC TGGCCTATGC GGCAACGTCC GCCGACGGCA CGGCGCTGCC TGGCTGGCTG AGCTTCAATG CCTCGACGAG GACCTTCTCC GGAACGGCGA CGACATCAGG TACCTATGGC GTCAGGGTCA CGACGACCGA CCTTGGCGGC CTCACCGCCA CTGAGACCTT CAACATCGCC GTGTCGACAT CAGGCAACAC GACGCCGACG GCGGTTGCCG ATGCCGGGGA TGCGACCGAG AAGGGTGGCG TGGGCAACGG TTCGGGCGGC GTTGTTGCCA GCGGCAACGT GCTGACCAAC GACACCGATG CGGATGCCGG TGACACCAAG GCGGTGACCG CAGTCGGCTT CGGCGCGACA TCAGGCACGC TCGGTTCGGC GCTGAACGGC GCCTATGGCA GTCTCGTGCT CAGTGCATCG GGCGTCTATA GTTATGCCGT CAACGAGACC AATGCCGCCG TGCAGGCATT GCGGCAGTCG ACCAACACGC TGAGCGAAGT CTTCAGCTAC ACGATGCGCG ACACTGCCGG CGCCACCGCC ACGGCCAACC TGACCGTCAC CATCCATGGC GCCAATGACG CGCCGGTGCT GGCTGTTCAG ACGGCTGCCC AGAACGCCAG CGTCGGCACA GCCTTCTCCT TTGTCCTGCC GACAACGACC TTCACCGATG TCGACAGCGG TGAAACGCTG ACCTACACGG CAACGGCTGC CGACGGCACG GCACTGCCTG CCTGGCTCGC CTTCAACGCC ACGACGCGGA CCTTCAGCGG CACACCGACG ACATCCGGCA CCTATGGCGT CAGGGTGACG GCAACCGACC TCGGCGGCCT TGCCGCCAAC GAGACCTTCA ATATCACTGC GACAGTGGCG CCTGCGACCT ACAGCCTGTT CAACGCCTCC AGCACACCGG CCCAGACCAA CCTCAACGAC GGTCAGCAGC TCGAGGTCGG CGTCAAGTTC CAGTCGAACG TTATCGGTGA TGTCACCGCC ATCAAGTTCT ACCGCAACGC CAACGACAAC GGACAGAACG TCGTCGATCT GTGGACCACG ACCGGCACCA AGCTTGCCAC CGCCACCTTC ACCAACACCA CGGCGAGCGG CTGGCAGACG GTGAACTTCA CAACGCCCGT CACCATCGCC GCCAACACCA CCTATATCGC CTCCTACCAC ACCACCGGTG CATACGTGGC TACCGATGGC TTCTTCGCCA ACGGCGTCAG CAACGGTCCG CTGTCGGCGC TATCCAGCGC TGCGGCTGGC GGCAATGGCG TCTATGCCTA CGGCGGATCT GCCACCACAG GTCTCTTCCC GACCAGCACC TTTGACTCGG CAAACTATTA TGCCGATGTG GTCTTCCGGC CGCAGCTTGC AGCTTGA
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Protein sequence | MYRNARRWTS RSLLLDSLVP RWLTVGGKGR PGKPADKRED SAQLATSVQT ADGNKHDGTL VDNPYNNAAL NEHDVGPSGG VIGDAEGGVD INHLALPLPA LPDAFTANRE TGVRSGDTAA SRLFAHTPGF ASFERDAHGV AFGAQSSLYR TYAGMSLIGD DPLAPYLSQS SSPIVSGQGS AAVTGERAHS GNVVILESSP SAQATAQHDG VNSLAFGMPF GVCGCGYFTS PTRILDWAHG GAVLQQDGQL PGTRLTEGPD FVSTIKRAIG ASISDPLLDR NLSPLSGWRG TATWTDSPIL NGSLPGGGEI GTGTATSKGI GTLSGSVTTP PSTQRSLTTQ NLAAAAAASN LIVLENQKQG NPESEWGIDG AGSSNIEGFA TDISVDNGKT ISFKINTNST NYRIDIYRLG YYGGMGARKV DTIQHTGLQN QPNPLRNATT GTVDAGNWAV SASWTAPEDA VSGVYIAKLV RQDGTSGENH IPFIVRDDDS HSDIVFQTAD QTWQAYNGWG GANLYGGNGP ATGQGAGRAY AVSYNRPIAT RGGVGTFAGP QDYLFGAEYA GIYWLEQNGY DVSYLSGVDA DRYGSLLLNH KTYVDAGHDE YWSGQQRTNV EAARDAGVNL MFWSGNEVYW RTRWGNAYSA DGTPYRTLIT YKETFSPGAS IDPSNEWTGT FRDPRLSPPA VGGGNPENSL TGQLFKVDDV GSNLAAITVG YDDANLRFWR NTSVANLQPG QTATLTKNYL GYEWDEAVDN GFDPAGLVKL SSTTLPVSTY LLDYGNTTGN ATSTHNLTLY RAPSGALVFG AGTVYWTWGL SDNHDNQATP TDPRVQQAMV NLLADMGIQP GTLQSGLVAT TGSTDHVAPT SVITVPATVA VGSNVTITGT AADTGGGVVA SVEVSTDNGA SWHPATGDEN WTYSWSPQVA GSYTIRSRAV DDNINLETPS AGRTVTVSGP SYTSLFGSAT PAVVNTDDTS AVELGVKFQT SVAGTVTGIR FYKGSQDTGT HTGSLWSSTG TRLATLTFTN ETASGWQIAY FTSPVALTAG QTYTASYHTN TGHYSTTADY FISNVTSGPL TAPASGNGVY TYGSASLFPT GTFQSTNYWV DVMFSTSGSN TTPTAVADAG DATEKGGVGN GSGGVVASGN VLTNDTDTDA GDTKTVTAIR FGATTGTLGS ALNGTYGSLV LSASGVYSYA VNETNAAVQA LRQSTNTLSD VFSYTMRDTA GATATASLTV TIHGANDAPV LAVQTASQNA TVGSAFSFTL PTTTFTDVDS GETLAYAATS ADGTALPGWL SFNASTRTFS GTATTSGTYG VRVTTTDLGG LTATETFNIA VSTSGNTTPT AVADAGDATE KGGVGNGSGG VVASGNVLTN DTDADAGDTK AVTAVGFGAT SGTLGSALNG AYGSLVLSAS GVYSYAVNET NAAVQALRQS TNTLSEVFSY TMRDTAGATA TANLTVTIHG ANDAPVLAVQ TAAQNASVGT AFSFVLPTTT FTDVDSGETL TYTATAADGT ALPAWLAFNA TTRTFSGTPT TSGTYGVRVT ATDLGGLAAN ETFNITATVA PATYSLFNAS STPAQTNLND GQQLEVGVKF QSNVIGDVTA IKFYRNANDN GQNVVDLWTT TGTKLATATF TNTTASGWQT VNFTTPVTIA ANTTYIASYH TTGAYVATDG FFANGVSNGP LSALSSAAAG GNGVYAYGGS ATTGLFPTST FDSANYYADV VFRPQLAA
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