Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6167 |
Symbol | |
ID | 8016180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | + |
Start bp | 213482 |
End bp | 214129 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644827473 |
Product | transcriptional activator, TenA family |
Protein accession | YP_002978673 |
Protein GI | 241258789 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.382073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00038061 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGCAG AGAGCCTTTC GGCCCGCATC CTGCGCGAGA ACGACGCTGT CCTTGGCGCG ATGCTGAACC ACCGCTTTGT CGAGGACGTG AAGAACGACA GGCTGAGCAA GGAGGCTTTC GAGCGTTATC TCGTCTATGA GGGCGCCTTC GTCGACAGCG CCATCTCGAT CTTCGCCTAT GCGGCGGCGA CCGCCAACAC CATGACGCAG AAGCGCTGGC TGATCGCGGT TCTCGACGCG CTTGCCAACG AGCAGATCGC CTATTTCGAA CGCACCTTCG CCGGCCGCGG CATCGATACC TCGTCCTTCG ACACCGGCAT CGCCGAGGTC GAGGCCTTTC GCGCCGGCAT GTTGGAAATC GCTCGCCAAG GCGGCTTCCT CGACACGGTC GCGGCGATGT TTGCGGCCGA GTGGATGTAT TGGACCTGGT CGAAGGAAGC AGCTAACCGC CCGATCAGCG ATCCCCTCTT GAAGGAATGG GTCGACCTGC ATGTCGATCC GAATTTCGCC GCCCAGGCGC AATGGCTGAA GAATGAACTC GACATGGCAG GAGAAACGCT GGAAGAGGAT GAAAAAGCGC GGCTCAGCGC AATCTTCGGC CGGGCGATGC AACTCGAGAT CGATTTTCAC GATGCGCCTT ATCTTTAG
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Protein sequence | MAAESLSARI LRENDAVLGA MLNHRFVEDV KNDRLSKEAF ERYLVYEGAF VDSAISIFAY AAATANTMTQ KRWLIAVLDA LANEQIAYFE RTFAGRGIDT SSFDTGIAEV EAFRAGMLEI ARQGGFLDTV AAMFAAEWMY WTWSKEAANR PISDPLLKEW VDLHVDPNFA AQAQWLKNEL DMAGETLEED EKARLSAIFG RAMQLEIDFH DAPYL
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