Gene Rleg_6167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6167 
Symbol 
ID8016180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp213482 
End bp214129 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID644827473 
Producttranscriptional activator, TenA family 
Protein accessionYP_002978673 
Protein GI241258789 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.382073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00038061 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGCAG AGAGCCTTTC GGCCCGCATC CTGCGCGAGA ACGACGCTGT CCTTGGCGCG 
ATGCTGAACC ACCGCTTTGT CGAGGACGTG AAGAACGACA GGCTGAGCAA GGAGGCTTTC
GAGCGTTATC TCGTCTATGA GGGCGCCTTC GTCGACAGCG CCATCTCGAT CTTCGCCTAT
GCGGCGGCGA CCGCCAACAC CATGACGCAG AAGCGCTGGC TGATCGCGGT TCTCGACGCG
CTTGCCAACG AGCAGATCGC CTATTTCGAA CGCACCTTCG CCGGCCGCGG CATCGATACC
TCGTCCTTCG ACACCGGCAT CGCCGAGGTC GAGGCCTTTC GCGCCGGCAT GTTGGAAATC
GCTCGCCAAG GCGGCTTCCT CGACACGGTC GCGGCGATGT TTGCGGCCGA GTGGATGTAT
TGGACCTGGT CGAAGGAAGC AGCTAACCGC CCGATCAGCG ATCCCCTCTT GAAGGAATGG
GTCGACCTGC ATGTCGATCC GAATTTCGCC GCCCAGGCGC AATGGCTGAA GAATGAACTC
GACATGGCAG GAGAAACGCT GGAAGAGGAT GAAAAAGCGC GGCTCAGCGC AATCTTCGGC
CGGGCGATGC AACTCGAGAT CGATTTTCAC GATGCGCCTT ATCTTTAG
 
Protein sequence
MAAESLSARI LRENDAVLGA MLNHRFVEDV KNDRLSKEAF ERYLVYEGAF VDSAISIFAY 
AAATANTMTQ KRWLIAVLDA LANEQIAYFE RTFAGRGIDT SSFDTGIAEV EAFRAGMLEI
ARQGGFLDTV AAMFAAEWMY WTWSKEAANR PISDPLLKEW VDLHVDPNFA AQAQWLKNEL
DMAGETLEED EKARLSAIFG RAMQLEIDFH DAPYL