Gene Rleg_6162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6162 
Symbol 
ID8016175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp208881 
End bp209702 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content63% 
IMG OID644827468 
ProductABC transporter related 
Protein accessionYP_002978668 
Protein GI241258784 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000823533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAAA GCGGACAGCG TGACATCGCT GCCGCCGGTT CCGGAGGCGT CGCATCCTCC 
GGAACCGGAA CATCCGGCGG CACCCGATCC GACCCGCGCA TCTCGCTGCG CGGCATCCGC
AAGTCGTTCG GCTCGCACCA GGCCCTGCGC GGCGTCGATC TCGACATCTT CCCCGGCGAA
TGCCTGGGCC TTGTCGGCGA TAACGCCGCC GGCAAATCGA CGCTGACGAA AATCATCTCG
GGAACCTACA TTCCCGATGC CGGCACGATC AGTATGGAAG GCGAAGAGGT TCGCTTCTCC
GGCCCCGCGG ATGCGCGTGG CAGAAACATC GAAATGGTGT TCCAGGATCT CAGTCTCTGC
GACCATATCG ATGTCGTAGG CAATCTCTTC CTCGGCCGCG AACTCAGCCG CGGGCCGTTT
CTCGACACCA GGACGATGCT GTCCGAAGCC CGCAAGATGC TGGATTCGCT TGAGATCCGC
ATCCCGAGGC TGACCGGCAA GGTCGCCCAG CTCTCCGGCG GGCAGCGTCA GGCGATCGCG
ATCGCACGCG CTGCCTCCTT CAAGCCGAAG GTGCTGATCA TGGACGAGCC GACGTCGGCA
CTTGCCGTCG CCGAGGTCGA AGCGGTTCTG GCCCTGATCA ACCGCGTCAA GGCGAACGGG
GTTTCGGTGA TCCTCATTAC CCACCGGCTG CAGGATCTCT TTCGGGTCTG TGACCGAATT
GCGGTGATGT ACGAGGGCAC GAAGGTGGCC GAACGGCAGA TCGGCAGCAC CAATCTCGAA
GATCTCGTCA GGCTGATCGT CGGTGAAGGA GCCAGACAAT GA
 
Protein sequence
MIESGQRDIA AAGSGGVASS GTGTSGGTRS DPRISLRGIR KSFGSHQALR GVDLDIFPGE 
CLGLVGDNAA GKSTLTKIIS GTYIPDAGTI SMEGEEVRFS GPADARGRNI EMVFQDLSLC
DHIDVVGNLF LGRELSRGPF LDTRTMLSEA RKMLDSLEIR IPRLTGKVAQ LSGGQRQAIA
IARAASFKPK VLIMDEPTSA LAVAEVEAVL ALINRVKANG VSVILITHRL QDLFRVCDRI
AVMYEGTKVA ERQIGSTNLE DLVRLIVGEG ARQ