Gene Rleg_6143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6143 
Symbol 
ID8016100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp186950 
End bp187939 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID644827449 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978649 
Protein GI241258765 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.637959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0297418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGAG CCATCATCCT CCTGAGGCGC AGGGCGATCA GTAGTATTCC GGTGCTGCTG 
ATCGTGGTGA TCTTCACCTT TTTCTTGCTT GAGTCAGCCT CGGGCGATGC GGTCGACGCC
TATCTCGGCT CGATCGGCGG CGGCGATGCG GCACTTAGGC AGGCGCTACG CGAGAGCTAC
GGCCTCGACC AATCGATGTT CGCGCGCCTC TGGCTCTATC TTTCCTCACT CGCACGCTTC
GATCTCGGCT GGTCGGTCGC CTTCGGCCGG CCGGTTGGTG CGCTCATTGC CGAACGCCTG
CCCAATACGC TGCTGCTGAT GGGCAGCGCG ATGGCGCTAT CCTTTGGCCT CGGCTCAGCG
CTCGGCATCC TTGCCGGAGC GCGGCCGGGC GGTCTGCGTG ACCGGCTGCT GTCGATCGGC
TCGCTGATCG TCTATGCCAT TCCGAGCTTC TGGCTCGGAC TGGTGCTGAG CATCGCCTTT
TCGGTGAAGC TGCGCTGGTT TCCGATCGCC GGCGTCGAGA CGATCGCTTC CGGCAAGACA
GGATTTTCGC GCGCGCTCGA TATCGCCGAT CACCTCGTTT TGCCGGTCGG TGCGCTCGCG
CTGATCTATC TCGCTCTGTT CCTGCGGGTG ATGCGCAGCG GCATGGTCGA GGCGTGGAAG
CTCGATTTCG TGCTCTTTGC CCGGGCCAAG GGTCTGTCGC GGAGCCGGAT CGTGCTGCGC
CATGTCGCGC GCAACGCGCT GCTGCCGCTC GTCACCATGC TCGGACTGCA ATCGGCGGCG
ATGCTCGGCG GCAGCGTGGT GATCGAGAGC GTCTTTGCGA TCCCGGGTTT CGGGCGTCTG
GCGCAAGAGG CGGTCAATGG CCGCGACGCG CCGCTGTTGA TGGGCATCGT CGTCACCAGC
GCCGTCCTCG TCATTTCCGT CAATTTCCTC GTCGATCTCG TCTATGCAGC ACTCGACCCG
CGCATCGGCG CTTCGGAGGG CGGCACATGA
 
Protein sequence
MKRAIILLRR RAISSIPVLL IVVIFTFFLL ESASGDAVDA YLGSIGGGDA ALRQALRESY 
GLDQSMFARL WLYLSSLARF DLGWSVAFGR PVGALIAERL PNTLLLMGSA MALSFGLGSA
LGILAGARPG GLRDRLLSIG SLIVYAIPSF WLGLVLSIAF SVKLRWFPIA GVETIASGKT
GFSRALDIAD HLVLPVGALA LIYLALFLRV MRSGMVEAWK LDFVLFARAK GLSRSRIVLR
HVARNALLPL VTMLGLQSAA MLGGSVVIES VFAIPGFGRL AQEAVNGRDA PLLMGIVVTS
AVLVISVNFL VDLVYAALDP RIGASEGGT