Gene Rleg_6142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6142 
Symbol 
ID8016099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp186129 
End bp186953 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content68% 
IMG OID644827448 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978648 
Protein GI241258764 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.266947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0172479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC TGCTGCGCAC GCCGGAAGGC GTGATCGGGC TTGTGATCCT TCTCGGCCTG 
CTTTCGGCCG GGCTGCTCGC CCCTATCCTT TCACCGGGCG ATCCACTGAA GATTGCCGGC
CGTGCGCTGC TGACGCCCTT CACCGATCCG GCTTTTCCGC TCGGCACCGA CCGGCTCGGC
CGCGACGTGC TGGCGGGCCT GCTTTATGGC GCGCGGACCT CGCTGGCCGT TGGCCTTGCG
GCAGCGTTTT CGGCCATGGT GCTTGGGCTC TGCGTCGGCA TGGCCGCCGG TTTTGCCGGC
GGGCTCGTCG ACGAAGCGCT GATGCGCGTG GTCGACGCCT TCCAGATCGT GCCGGCTTTT
CTGCTTGCCC TTGCCTTCGT CAGCACCATC GGCGTCTCGA CGCCTGTCGT CGTCATTGCC
ATTGCGCTCG GCACCTGGGC CGATCCGGCG CGGCTGACGC GAGCGCAGGT GCTTGCCATC
CGCGAGCAGG ATTACGTCGC CTCGGCAAGG GTGATCGGCA TGCATCCGGC CGAGATCGCC
TTCCGGGAAA TCCTGCCGAA CGCGCTGCCG CCGGTGCTGG CGCTCTCCGC CACCATCGTC
GCCGGCGCGA TCCTCACCGA GGCAGCGCTG TCCTTCCTTG GCCTCGGCAA CCCCAATATC
GCCACCTGGG GTTCGATGAT CGCCGAGGGC CGCAGCGTGC TGCGCTCGGC ATCCTATCTC
TCCGTCATAC CGGGCGCGGC GCTCGCCATC ACCGTGCTCG GCGTCCATCT CTTCAGCGAG
GGTCTCGGCA AGGCGCTCGG CGATAACGAT GCGAGGGCGG CATGA
 
Protein sequence
MSRLLRTPEG VIGLVILLGL LSAGLLAPIL SPGDPLKIAG RALLTPFTDP AFPLGTDRLG 
RDVLAGLLYG ARTSLAVGLA AAFSAMVLGL CVGMAAGFAG GLVDEALMRV VDAFQIVPAF
LLALAFVSTI GVSTPVVVIA IALGTWADPA RLTRAQVLAI REQDYVASAR VIGMHPAEIA
FREILPNALP PVLALSATIV AGAILTEAAL SFLGLGNPNI ATWGSMIAEG RSVLRSASYL
SVIPGAALAI TVLGVHLFSE GLGKALGDND ARAA