| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6105 |
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| Symbol | |
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| ID | 8016062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012852 |
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| Strand | - |
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| Start bp | 142381 |
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| End bp | 145920 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644827411 |
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| Product | urea carboxylase |
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| Protein accession | YP_002978611 |
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| Protein GI | 241258727 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.164711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.417784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCA AGGTTCTTAT CGCCAATCGC GGCGAGATCG CCGTCCGCGT CATCCGCACA
TTGAAGAGGA TGGGCATTGC CTCGGTCGCC GTCTATTCCG ATGCCGATCG CTTCTCGATG
CCGGCGCTGA CCGCCGACGA GGCCGTACGC CTCGGCCCGG CGCCAGCCGC TGAGAGCTAT
CTCAACGTCG ATGCCGTCAT CGCCGCCTGC AAGGTGACGG GGGCGCAGGC CGTGCACCCA
GGCTACGGTT TCCTCTCGGA GAATATCGGC TTTGCCGAGC GGCTCGCCGC CGAGGGTATC
GCCTTCATCG GCCCGCGCCC AGAGCATCTG TCGGCCTTCG GCCTGAAGCA TACGGCGCGC
GAATTGGCGA AAGCGAGCGG CGTGCCGCTG CTGCCCGGCA CCGATCTCTT GCAGAGCGTC
GAGGATGCGC TTTCGGCTGC CGAGATCGTC GGTTATCCCG TCATGCTGAA AAGCACGGCC
GGCGGCGGCG GCATCGGCAT GCAGCTCTGC GCCGATGCCG CCGGCCTCAA GGCTTCCTTC
GAAAGCGTGC AGCGGACCGC GCGCGCCAGC TTCGGGGATG CGCGCGTCTA CATCGAGCGT
TTCGTTGCCG AAGCGCGCCA TGTCGAGGTG CAGATCTTCG GCGACGGCAA GGGCGGAGTG
ATTGCGCTCG GCGAACGCGA CTGCTCGCTG CAGCGGCGGA ACCAGAAGGT GGTCGAGGAG
ACCCCTGCGC CTGGCCTTTC CGCGGAGATA CGGGCGCGGC TGCACAAGGC GGCGGTCGAT
TTGGGAAGTT CGGTCTCCTA TGAATCGGCC GGCACCGTCG AATTCATCTA TGATCCCCAG
CGCGAGGAAT TCTATTTCCT CGAGGTCAAT ACCCGCCTGC AGGTCGAGCA CCCGGTGACG
GAAGCCGTCT TCGGCATCGA TCTCGTCGAA TGGATGATCC GGCAGGCGGC CAGCGAGGAC
GTGCTCTCCG GAGCTATGGG CCTGACGCCG AAGGGTGCGG CGATCGAGAT GCGTGTTTAT
GCCGAGATGC CGCATGCCGA TTTCCGCCCG AGCGCAGGCC TGCTAACCGA GGTCGTCTTC
CCTGACAATG CTCGCGTCGA CGGCTGGATC GAGACGGGAA CCGAGGTGAC GCCCTTCTAC
GACCCGATGC TTGCCAAGCT GATCGTGACG GCGGAAGACC GGCCGGCGGC GATCGAGAAG
CTGAAGGCAG CACTCGCTGA AACGTCGATA TCAGGCATCG AGACCAACCT CGATTATCTC
AGGACGATCG CCGCTTCCGA GCTGCTCGCC GGCGCCAAGG TGGCGACGAC GGCGTTGCGC
GACTTCGCCT TCGTTCCCGA CGTCGTCGAG GTGCTTGCGC CCGGCGCGCA GTCGAGCATT
CAGGAACTGC CGGGCCGGCT CGGCCTTTGG CATGTCGGCG TGCCGCCAAG CGGTCCGATG
GACGAGCGCT CCTTCCGCCA TGCCAATCGG CTGGTCGGCA ATGACGATGT AACGGCCGCA
CTCGAACTGA CCGTTTCCGG CCCGACCCTG CGGTTTTATG CCGACCAGAC GATCGCGCTT
GCCGGCGCCC GGATGGCGAT GACCTGCGAT GGTGCAAAGC TGCCGCATGA TACGCCGGTG
CTGATCCGCG CCGGCCAGGT TCTGTCGATC GGCACGATCG AAGGACCCGG GCAGCGCGCC
TATCTCGCCG TCGCCGGCGG TTTTGCAGCT CCCGTCGTGC TCGGCTCGCG GGCGACGTTC
GGCCTCGGCC AATTCGGCGG TAACGCCACA GGCACGTTGA AGACGGGGCA TGTGCTTCAT
TTTGCCCGGC AGGTGGCAAC CGAACCGGCG ACGCCCGCAA AGGAGCCGGC CACCTTGACG
CGCGAATGGG ATGTCGGCGT CGTCTACGGC CCGCACGGCG CGCCAGATTT CTTCGAGGAT
AACGATATCG AGACGCTGTT CTCGACGGCG TACGAGGTGC ATTTCAACAG CGCCCGCACC
GGCGTTCGCC TCATCGGCCC TGCTCCGGTT TGGGCACGCC ACGATGGCGG CGAGGCGGGG
CTGCACCCCT CCAACCTGCA CGATAATGCC TATGCGATCG GGGCGATCGA TTTCACCGGC
GACATGCCGA TCATTCTCGG CCCCGACGGT CCGAGCCTTG GCGGCTTCGT TTGCCCGGCG
GTGATTGCCC GCGACGAGCA GTGGAAGATG GGCCAGTTCA AGCCCGGCGA CCGTATCCGT
TTTCATGCAG TGGCGCGGCC GGAAGACCCG ATCGCCGGCC CGGCGGTGCG GCGGCCCACG
GAAGAAACAG GTTCGCCGAT CCTCGGCATC AGCGAGGATG GCCCGGTTTC TGTCGTTTAT
CGCCGCCAAG GCGACGACAA TCTGCTCGTC GAATATGGGC CGATGACGCT CGATATCGCG
CTTCGCCTGC GGGTGCATCT GCTGATGCAG GCGGTCATCG AGGCTCGCCT TCCTGGCATC
GTCGACCTTA CCCCCGGCAT CCGCTCGCTG CAGATCCATT ATGACGGCAC GCAGCTGACG
CGAAAGCGCC TGCTGGGGCT TCTGGCGGCG ATCGAGGCGA CGCTTCCGGC AGCGCAGGAG
GTCACGGTGC CGAGCCGCAT CGTGCATCTG CCGCTCTCCT GGAACGATCC GGATGCGGAG
CTTGCGATGC GCAAATATCA GGAGCTGGTG CGCCCGAATG CGCCCTGGTG CCCGTCGAAT
ATCGAGTTCA TCCGCCGCAT CAACGGTCTT CCCGACGAAC AGGCCGTTCG CGATATCGTC
TTCGATGCCA GCTACCTGGT GCTGGGTCTC GGCGACGTCT ATCTCGGCGC GCCGGTTGCG
ACCCCGACCG ATCCGCGCCA CCGTCTCGTG ACGACGAAGT ATAATCCCGC TCGCACCTGG
ACGCCGGAAA ATGCCGTCGG CATCGGCGGC GCCTATATGT GCATCTATGG CATGGAAGGA
CCGGGCGGCT ACCAGCTCTT CGGCCGCACC ATCCAAGTCT GGAACACTTG GCGGGAGACG
CCGGTCTTTG CCAAGGGAAA ACCTTGGCTG CTGAACTTCT TCGACCAGAT CCGTTTCTTC
CCGGTCAGCA ATCAGGAGCT GACGGAGGCG CGCGCCGCCT TCCCGCACGG GGGCTATCCG
ATTCGGATCG AGGAGACGGA ATTCTCCTAT GCCGCTTACG AGAAGGAATT GCAGGCGAAT
TCGGCGTCGA TCGGCCGTTT CAAGGCAACG CAGCAGGCCG CCTTCGATAC TGAGCGCCAA
CGCTGGAAGG AAGCCGGGCT CGACAGCTTC GTCACCGATG AAGGCACGGG CGAAAGTCCG
GATGGGGATA TTCCCGACGG CTGCTTCGGT GTTGCCAGCG CCGTGCCCGG CAATATCTGG
AAATTGCTGG TCGAGCCGGG CGCCTCGGTT GCGGCCGGCG ATACACTCGC CATCATCGAA
TCGATGAAAA TGGAAATCAA CGTCACCGCC CATGCGGCAG GCCGCGTCCG CGACCTGCGC
GCCGGGCCGG GAAGAAACGT CAAAGCCGGC GATATCATCG TCGTTCTGGA GGAATGCTGA
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| Protein sequence | MFTKVLIANR GEIAVRVIRT LKRMGIASVA VYSDADRFSM PALTADEAVR LGPAPAAESY
LNVDAVIAAC KVTGAQAVHP GYGFLSENIG FAERLAAEGI AFIGPRPEHL SAFGLKHTAR
ELAKASGVPL LPGTDLLQSV EDALSAAEIV GYPVMLKSTA GGGGIGMQLC ADAAGLKASF
ESVQRTARAS FGDARVYIER FVAEARHVEV QIFGDGKGGV IALGERDCSL QRRNQKVVEE
TPAPGLSAEI RARLHKAAVD LGSSVSYESA GTVEFIYDPQ REEFYFLEVN TRLQVEHPVT
EAVFGIDLVE WMIRQAASED VLSGAMGLTP KGAAIEMRVY AEMPHADFRP SAGLLTEVVF
PDNARVDGWI ETGTEVTPFY DPMLAKLIVT AEDRPAAIEK LKAALAETSI SGIETNLDYL
RTIAASELLA GAKVATTALR DFAFVPDVVE VLAPGAQSSI QELPGRLGLW HVGVPPSGPM
DERSFRHANR LVGNDDVTAA LELTVSGPTL RFYADQTIAL AGARMAMTCD GAKLPHDTPV
LIRAGQVLSI GTIEGPGQRA YLAVAGGFAA PVVLGSRATF GLGQFGGNAT GTLKTGHVLH
FARQVATEPA TPAKEPATLT REWDVGVVYG PHGAPDFFED NDIETLFSTA YEVHFNSART
GVRLIGPAPV WARHDGGEAG LHPSNLHDNA YAIGAIDFTG DMPIILGPDG PSLGGFVCPA
VIARDEQWKM GQFKPGDRIR FHAVARPEDP IAGPAVRRPT EETGSPILGI SEDGPVSVVY
RRQGDDNLLV EYGPMTLDIA LRLRVHLLMQ AVIEARLPGI VDLTPGIRSL QIHYDGTQLT
RKRLLGLLAA IEATLPAAQE VTVPSRIVHL PLSWNDPDAE LAMRKYQELV RPNAPWCPSN
IEFIRRINGL PDEQAVRDIV FDASYLVLGL GDVYLGAPVA TPTDPRHRLV TTKYNPARTW
TPENAVGIGG AYMCIYGMEG PGGYQLFGRT IQVWNTWRET PVFAKGKPWL LNFFDQIRFF
PVSNQELTEA RAAFPHGGYP IRIEETEFSY AAYEKELQAN SASIGRFKAT QQAAFDTERQ
RWKEAGLDSF VTDEGTGESP DGDIPDGCFG VASAVPGNIW KLLVEPGASV AAGDTLAIIE
SMKMEINVTA HAAGRVRDLR AGPGRNVKAG DIIVVLEEC
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