| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5433 |
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| Symbol | |
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| ID | 8016005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012851 |
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| Strand | - |
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| Start bp | 35888 |
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| End bp | 36928 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644827264 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002978464 |
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| Protein GI | 241258198 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCC TGTCGTGGAC GCTGCGCCGG CGCCTGTATC AACAGGCTTC GTCGCAACTA
GATAACGGGA TGACGCTTTC GCAGGTGCTT GGGGAGTTCA GCACGCGCTT AGCGCGCCGT
GGGCGCAAGC GTGCCGCAGA GGCCGCCGAT GAGGTTGCGC GACGGGTGGT GGACGGCGAT
CCCTTCGTTC TAGCTTTGGG CGACGACCTT TCGGACTTGG AGCGCAGCGT GCTCGATGCC
GGCGACCAAG CCGGCCAGTT GCCGGATTCC ATGCGCCTGG TGATGGAAGT GCGTGATCTC
ACCACGCGCC TACGTCAGAA GCTGCAGGCG AGTTTCTTCG CACCCTCCGT CTACCTGGTT
AGCTTGTACG CGGTGCTGTT GTTGATTGGT GCCTCGATCG TGCCGCAGTT CCTGGACGTG
CTGCCGCTCT CCAAGTGGAC CGACTGGGCC TATGCGATGT ACCTGATGGG GGATCTCGCC
GTCGGCTGGC CGGCACCGAT TTGCTTCGGC GGGCTGCTGA TCTATGCCGT CTGGTCATGG
TGGGCGCTGC CGCGCTGGAT TGGACCCGCG CGCGCGTTCT GCGACAGGCG CTTGTTCCCC
TTCACGGTGT ATCGGGAAAT CACCGGCTTC ACCTGGTTAC TGTCGTTCGT CGCGCTATTG
CGCGCCGGCA TCCCAGACAC GGTGGCGCTG GACAACCAGA TTGCGTCCGC TTCGCCGTGG
CTTGCCTCGC GTCTGAAACC TATCCGCAAT GGGCTGATTG ATGGCCTGAG CCTACCGGAA
GCCATGCGGG CTACCGGGTA CGGCTTTCCA TCCCCGGACT TGATCGATGA GATCGGCGCC
TACGCCGGCT TTGACGACTT CACCGACAAG ATCGCCGTGG CCGTGCGCCA GTACGCGGAA
GTCATCGAGC GGCAACTGCT CGCGCGGGGC ATGTTGATGT CGGCGGTCTT CACGGGGTTC
ATGTTTCTCG CTTTCGTGGT GCTGCAGCTT GGCGCCAACT CGCTTTCATC GATTCTCACG
TCCGCGATGG GGCAAATCTG A
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| Protein sequence | MSGLSWTLRR RLYQQASSQL DNGMTLSQVL GEFSTRLARR GRKRAAEAAD EVARRVVDGD
PFVLALGDDL SDLERSVLDA GDQAGQLPDS MRLVMEVRDL TTRLRQKLQA SFFAPSVYLV
SLYAVLLLIG ASIVPQFLDV LPLSKWTDWA YAMYLMGDLA VGWPAPICFG GLLIYAVWSW
WALPRWIGPA RAFCDRRLFP FTVYREITGF TWLLSFVALL RAGIPDTVAL DNQIASASPW
LASRLKPIRN GLIDGLSLPE AMRATGYGFP SPDLIDEIGA YAGFDDFTDK IAVAVRQYAE
VIERQLLARG MLMSAVFTGF MFLAFVVLQL GANSLSSILT SAMGQI
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