Gene Rleg_4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4489 
Symbol 
ID8015251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4620088 
End bp4620951 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID644827065 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978266 
Protein GI241207170 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACCGA TCGCATCGAC CGCCATTGCC AGCCGCCGCC GGATCTTTAG ACTTAGCCGG 
CGAATGAACC TGATTTCAGG GACTGTGATC ATCGGGCTGC TGGTCGCCGT CGCGCTGCTG
TCGCTCGTCT GGACGCCGCT GCCGCCGGCG AAAATGCAGA TCATCCACAA GCTGCAGCCG
CCGCTTGCCT TCGGCCTGCT CGGCACGGAC CAGTTCGGCC GCGACGTGCT TTCGATGCTG
ATGGCAGGTT GCTGGAATTC ACTGTCAATC GCCATCACAG CGGTTATGAT CGGCGGGACG
CTGGGTTCGA TATCAGGTAT TTCGGCGGCG GCGATCCGCG GTCCTTTCGA AGCCCTGCTG
ATGCGCATCT GCGATGTCAT CTTTGCGCTG CCGCCGATCC TGTCCGCCAT GATGCTCGGC
GCCTTTCTCG GGCCAGGGCG GTTCACCGCG ATCACGGCGA TTGCCGTCTT CATGATCCCG
GTCTTTGCCC GCGTCACACT CGCGACCTCG CTGCAGGCCT GGAGCCGCGA CTATGTGACG
GCGGCGCGCG CCATCGGCAA TACGCGACTG ACGATTTCGC TGCGCCATGT GCTGCCGAAT
ATCATCAGCC AGATCATCGT GCATGGCGCG ATCCAGCTGG GGCTGGCGAT CCTCACCGAA
GCGGGTCTTA GCTTCCTCGG GCTCGGCATG GCGCCGCCGG CGCCGACCTG GGGCCGGATG
CTTGGCGATG CGCAAACCTA TCTGGCGCTC GCCCCCTGGC TGGCGATCCT GCCCGGTCTT
GCCATCGCGC TCACCGTCTT CGGCTTCAAC ATGCTCGGCG ACGGTTTGCG CGATCTGCTC
GACCCGCGCG AGGCAAGCCG CTGA
 
Protein sequence
MVPIASTAIA SRRRIFRLSR RMNLISGTVI IGLLVAVALL SLVWTPLPPA KMQIIHKLQP 
PLAFGLLGTD QFGRDVLSML MAGCWNSLSI AITAVMIGGT LGSISGISAA AIRGPFEALL
MRICDVIFAL PPILSAMMLG AFLGPGRFTA ITAIAVFMIP VFARVTLATS LQAWSRDYVT
AARAIGNTRL TISLRHVLPN IISQIIVHGA IQLGLAILTE AGLSFLGLGM APPAPTWGRM
LGDAQTYLAL APWLAILPGL AIALTVFGFN MLGDGLRDLL DPREASR