| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4478 |
|---|
| Symbol | |
|---|
| ID | 8015241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 4609118 |
|---|
| End bp | 4610395 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644827054 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_002978255 |
|---|
| Protein GI | 241207159 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.942803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA TCGAATACGA AATCAAAAAC CCCAGCGAGC TTCGCAACGC CGAGGAGGCG
GTGCGCATGG CGGATCTGGA AAACATGCGG CCGTTGCCGC GCATCTCCGT CCACGCCTTC
TGCGAGAGCG AGGTCCTGCA GCATGTCATG GAACGCTGCG CCAATGATCG GCGCGTCGCG
AAAGTCAGCA TGCGCATCAC CAGCGGCGGC ATCGCCGCTG CCGCCAATAT GTTTTCCGGC
GCCCCGACGC CGAACCTCAT CATCCTCGAG ACCAAGGCGA ATGCCGCGAA CCTGCTCGGC
GAACTCGCAC CGCTCGCCGC CGTCTGCGAT CCGACGACCA AGGTCGTCAT TATCGGCTAT
TACAACGATA TCGGGCTTTA TCGCGAACTC ATCCGCAACG GCATTTCCGA ATATATGGTC
CAGCCCGTCG CCATGCCCGA TATCCTTGCG GCGATGGCCT CGATCTTCGT CGATCCGGAA
GCCGAGCCGC TTGGCCGCAG CATCGCCTTC ATCGGCTCGA AGGGCGGCAC CGGCGCTTCG
ACCATCGCGC ATAATTGCGC CTTCGGCATT TCCAATCTCT TCTCCACCGA GACGATCCTC
GCCGATCTCG ACCTGCCTTA TGGCACGGCG AACATCGATT TCGACCAGGA TCCGGCCCAG
GGCATCGCTG AAGCGGTCTT CGCACCCGAT CGTCTCGACG AGGTCTTCCT CGACCGCCTG
TTGACGAAAT GCTCCGAGCA TCTGTCGCTG CTTGCCGCAC CCTCGCTGCT CGACCGTGCC
TATGATTTCG ACGGCCAGGC CTTCCAGCCG GTGCTCGATG TTCTGCAGCG CAGCGCGCCC
GTCACAGTGC TCGATGTCCC GCATGCATGG TCGGAATGGA CGCGCTCGGT GCTGTCGAGC
GTCGACGAGG TGGTCATCGC AGCGGTTCCC GATCTCGCCA ACCTGCGCAA CGCCAAGAAT
ATGCTCGACG CGCTGCGCAA GATGCGGCCG AACGACCGGC CGCCGCATCT CATCCTCAAT
CAGGTCGGCA TGCCGAAACG GCCGGAAATT TCGCCGTCGG ATTTCTGTGA GCCGCTGGAG
ATCGATCCGA TCGCGATCAT TCCCTTCGAC ATCCATCTTT TCGGCAACGC CGCCAACAGT
GGCCGGATGA TCTCGGAAGT CGACCCGAAG TCGCCGACGG CGGAAACCTT TTCGCAGATA
TCGCACATCG TCACCGGCCG TGTCGCGATC AAGAAGGCGA GGAAGGGCGG CCTGCTGGGC
CTCCTAAAGC GCAAATAG
|
|---|
| Protein sequence | MSAIEYEIKN PSELRNAEEA VRMADLENMR PLPRISVHAF CESEVLQHVM ERCANDRRVA
KVSMRITSGG IAAAANMFSG APTPNLIILE TKANAANLLG ELAPLAAVCD PTTKVVIIGY
YNDIGLYREL IRNGISEYMV QPVAMPDILA AMASIFVDPE AEPLGRSIAF IGSKGGTGAS
TIAHNCAFGI SNLFSTETIL ADLDLPYGTA NIDFDQDPAQ GIAEAVFAPD RLDEVFLDRL
LTKCSEHLSL LAAPSLLDRA YDFDGQAFQP VLDVLQRSAP VTVLDVPHAW SEWTRSVLSS
VDEVVIAAVP DLANLRNAKN MLDALRKMRP NDRPPHLILN QVGMPKRPEI SPSDFCEPLE
IDPIAIIPFD IHLFGNAANS GRMISEVDPK SPTAETFSQI SHIVTGRVAI KKARKGGLLG
LLKRK
|
|---|
| |