Gene Rleg_4472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4472 
Symbol 
ID8015236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4604299 
End bp4604709 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content62% 
IMG OID644827048 
Productpilus subunit transmembrane protein 
Protein accessionYP_002978249 
Protein GI241207153 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4964] Flp pilus assembly protein, secretin CpaC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.619064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGA GCGGCAAAAC CATTTTCTTT GCCGGCATGA TCGCCGTTTT CGGTATTTCG 
GGAGTTTCCG CGGCCGCAGA CGATGACATG CTGCGCGTCT ATATGGATCA CGCGCGCGTC
TTGAAACTCG ACCGCCCCGT CAGCAAGGTG ATTGTCGGCA ATGCCGCAGT CGCCGATGCA
ACGGTCGCCG ACGCCAAGAC CATCGTGCTG ACGGGACGCA GCTTCGGCAC CACCAATCTG
GTGCTTCTCG ATGCCGACGG CAATGCGATC CTCGACGAAC GCATCCTGGT GTCGATCGAC
GAGGGCAATA CGGTACGCGT CTACCGGCAG ACGCAGCGCT CCGTGCTGTC CTGCACGCCG
AATTGCGAGC AGCATGCGCA GCAAGCGGCC ACCGCGACCG CCTCACCCTG A
 
Protein sequence
MSSSGKTIFF AGMIAVFGIS GVSAAADDDM LRVYMDHARV LKLDRPVSKV IVGNAAVADA 
TVADAKTIVL TGRSFGTTNL VLLDADGNAI LDERILVSID EGNTVRVYRQ TQRSVLSCTP
NCEQHAQQAA TATASP