Gene Rleg_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4406 
Symbol 
ID8015177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4532995 
End bp4533942 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content65% 
IMG OID644826981 
ProductAuxin Efflux Carrier 
Protein accessionYP_002978183 
Protein GI241207087 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCA TCATTCTCGA CGTCCTTCCC ATCTTCATCC TGATTCTCAT CGGCTGGGTG 
ATCGTCCGCA GCGGGTTGAT GGCGTCGAAT GTCGGCGAAG CGCTCAGCGA ATTCGTCTTC
AAGATCGCCG TGCCGCTTCT ACTTTTCCGC ACCATCGCCG AGGCGGATTT TCATGGCGCC
TCGCCTTTTC GTCTCTGGGT CGTCTACTTT TCCGGCGTCG CCATCACCTG GACAGCCGGC
CATATCGCCG CGACACGGCT CTTCGGCCGC GACGAACGTA TCGGCGTGCT GGCCGGCGTC
TCCTCGGCCT TCGCCAACAA TATCTTCATC GGCCTGCCGC TCGTCGAGCG GACCGTCGGC
GACGAAGGGC TGGTGGCGCT GTCGATCCTG CTTGCCGTGC ATCTGCCCGT GATGATGGTC
GCCGGCACGG TGTTGATGGA GCATGCGGAG CGCAAGATCG CCGGCAAAAG CGATCGCAGC
ATGATGCTCG TGCTCCGCCA GATCGCGGTC AATCTCGTGC GCAACCCGCT GGTGATCGGC
CTTGCGGCCG GCATGGCCAT GCACCTTTCC GGTCTCACCA TGCCGACGAC GCTGGCAACG
GTCGTCGGGC AGATCGCCGG CATTGCCGGC CCGGCGGCGC TGATATCGCT CGGCATGGCG
CTGGAGAGAT ACGGTGTCTC CGGCAATCTC GGCATCGCCA GCGTCACCTC AAGCCTGAAG
CTGCTGCTGC TGCCTGGCTG CGTGTGGGCG GCGAGCCGTC TCCTCGGTCT CAGCCCCGAA
TGGACGGCAG CGATCGTGCT GACCTCCTCC GTCCCGACAG GCGTCAACGC CTGGCTGATC
GCCAATCGCT TCGGCGTCGG TCACAGCCTC GCCGCCTCGA CGATCACCGT GACGACGGCG
CTCGGCGCCA TCACGGTCTC GCTCTGGGCC TATTTCCTCG GCGCCTGA
 
Protein sequence
MSAIILDVLP IFILILIGWV IVRSGLMASN VGEALSEFVF KIAVPLLLFR TIAEADFHGA 
SPFRLWVVYF SGVAITWTAG HIAATRLFGR DERIGVLAGV SSAFANNIFI GLPLVERTVG
DEGLVALSIL LAVHLPVMMV AGTVLMEHAE RKIAGKSDRS MMLVLRQIAV NLVRNPLVIG
LAAGMAMHLS GLTMPTTLAT VVGQIAGIAG PAALISLGMA LERYGVSGNL GIASVTSSLK
LLLLPGCVWA ASRLLGLSPE WTAAIVLTSS VPTGVNAWLI ANRFGVGHSL AASTITVTTA
LGAITVSLWA YFLGA