Gene Rleg_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4110 
Symbol 
ID8014908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4186919 
End bp4187956 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content64% 
IMG OID644826680 
ProductABC transporter related 
Protein accessionYP_002977890 
Protein GI241206794 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGC TCACGATCGA AAACATCAGC AAGCGCTATG GCCCCGTCCA GGCGCTGAAG 
GATATTTCGC TCGAAGTCTC GGCCGGAAGC CGCACGGCCG TCGTCGGCCC GTCCGGTTCA
GGCAAGACGA CGCTGTTGCG CATCATTGCC GGCTTCGAGC AACCCGATGT CGGCAGGGTG
ACGCTGGACG GCGACCTGCT CGCGGACGGT CCGGCGACAG TACCGGCGCA TAAACGCGGC
ATCGGCATCG TCTCGCAGGA CGGCGCGCTG TTTCCGCACT TAAGCGTTGC AGAAAATATC
GGCTTCGGCT TCGAACGAAG GGCAGCCGAT CGCGAGAAGC GCATCGTCGA GTTGCTCGAT
ATGGTCGAAC TCGACCGCGG CATGCTGGCG CGGCGTCCGC ATCAGCTTTC CGGCGGGCAG
CAGCAGCGCG TGGCGCTCGC CCGCGCGCTC GGCCGTAAGC CGCGGCTGAT GCTGCTCGAC
GAACCTTTCT CGGCACTCGA TACCGGCCTG CGTGAAAATA TGCGCAAGGC GGTTGCGCGC
GTGCTGCAGG CGGCCGGCAT CACCACCATT CTCGTCACCC ATGATCAGGA AGAGGCTCTG
ACCTTTGCCG ATCAGGTCGC GGTTCTGAGG GAGGGACGGC TGATCCAGGC CGGGTCGCCG
CAATCCTTGT ACCTGCATCC GCGCGATCGC GAGACGGCAC TGTTTCTCGG CGATGCCGTG
CTGCTTCCCG CCATCATCCG CAACGGCTTG GCAGACTGCG CCCTTGGCCA TGTCGCCGTC
GAAGGCAGCC GTCAGGGCAA GGCGGAGATC ATGCTGCGTC CCGAGCAGAT TCGCGTCGTT
GCCGATGAAG GCGATCGCAA CTATGGCGGG CGTGTCGTCG AAGTGGAATT CGGCGGCGCA
GTCTGCACCG TCGCCGTCTC GCTCGAAGGT GTGGCGTTGC CGCCGATCCT TATCAAGACC
TCGAGCGTCG CTCTTCCGGC GCGGGGAGAC CTCGTTCGCC TCGATATCGC CGGCAAGGCG
CATGTCTTCG AGAACTGA
 
Protein sequence
MTLLTIENIS KRYGPVQALK DISLEVSAGS RTAVVGPSGS GKTTLLRIIA GFEQPDVGRV 
TLDGDLLADG PATVPAHKRG IGIVSQDGAL FPHLSVAENI GFGFERRAAD REKRIVELLD
MVELDRGMLA RRPHQLSGGQ QQRVALARAL GRKPRLMLLD EPFSALDTGL RENMRKAVAR
VLQAAGITTI LVTHDQEEAL TFADQVAVLR EGRLIQAGSP QSLYLHPRDR ETALFLGDAV
LLPAIIRNGL ADCALGHVAV EGSRQGKAEI MLRPEQIRVV ADEGDRNYGG RVVEVEFGGA
VCTVAVSLEG VALPPILIKT SSVALPARGD LVRLDIAGKA HVFEN