| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4071 |
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| Symbol | dapF |
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| ID | 8015884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4147615 |
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| End bp | 4148520 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644826640 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002977851 |
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| Protein GI | 241206755 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCAA CGGTCGAATT CGCGAGGATG AACGGGCTTG GCAACAAGAT CCTGGTCGTC
GACATGCGCG GCCGGCCGGA CAAGGTGACG CCGGCGGCGG CGGTGGCGCT CAATGCCGAT
CCGCAGACTG AGTTCGATCA GATCATGGCG ATCCATGATC CGAAGGCCGA AGGCACCGAT
GCCTTCATCG ATATCCTGAA TTCCGATGGC TCGAAGGCGC AGGCCTGCGG CAACGGCACG
CGCTGCGTCG TGCAGGCGCT TGCCGCCGAG ACCGGCAGGA AGGCCTTCAC CTTCCAGACG
GTTGCCGGCA TCCTCAACGC CGTCGAGCAC GAGGACGGGA CGATCTCCGT CGATATGGGC
CGGCCGGTCT TCGATTGGGA CAGGATCCCG CTGGCGGAAG AATTCCACGA CACCAGCCGC
ATCGAGTTGC AGATCGGTCC GATCGACAAG CCGGTGCTGC ATTCGCCTTC GGCAATGTCG
ATGGGCAATC CGCATGCGAT CTTCTGGGTG GACAGGGACG TGATGTCCTA TGATCTCGCC
CGCTTCGGAC CGTTGCTCGA AAACCATCCG ATGTTTCCCG AGCGCGCCAA TATCACGCTG
GCGCAAGTGA CGTCGCCGAC ATCGGTGACG ACGCGCACCT GGGAGCGCGG CGCGGGACTG
ACGCTTGCCT GCGGCTCGGC TGCCTGTTCT GCTGCCGTCA GTGCTGCGCG CACCGGCCGC
ACCGGCCGCA AGGTGACGAT CAATGTGGCA AGCGCCAAGC CGCCGGCCAC GCTTTCCATC
GAATGGCGCG AGCGCGACGA TCATGTCATC ATGACCGGCC CGGCCGAATG GGAATGGTCG
GGCAGGGTCG ATCCTTCGAC CGGTCTCTGG TCGCGCGAGG GTACCCGAGA GGCGGAGGCG
CAGTGA
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| Protein sequence | MSATVEFARM NGLGNKILVV DMRGRPDKVT PAAAVALNAD PQTEFDQIMA IHDPKAEGTD
AFIDILNSDG SKAQACGNGT RCVVQALAAE TGRKAFTFQT VAGILNAVEH EDGTISVDMG
RPVFDWDRIP LAEEFHDTSR IELQIGPIDK PVLHSPSAMS MGNPHAIFWV DRDVMSYDLA
RFGPLLENHP MFPERANITL AQVTSPTSVT TRTWERGAGL TLACGSAACS AAVSAARTGR
TGRKVTINVA SAKPPATLSI EWRERDDHVI MTGPAEWEWS GRVDPSTGLW SREGTREAEA
Q
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