Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3983 |
Symbol | |
ID | 8014795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 4059271 |
End bp | 4060128 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644826552 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002977763 |
Protein GI | 241206667 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.272698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGATC TTGATTCCTA TCTGCTTCGT GCATTTCTGA CCGTCGCGGA GATCGGCACC GTCAATGGAG CAGCCGTCAA GCTGAACAGA ACGCAGGCCG CCGTGAGCAT GCAGATCCGC AAGCTGGAGG AGCTTGTCGG CGTTACGCTG TTTTCGCGTT CGTCAAAGGG CCTCGAGCTG ACGAGCCATG GGCAGATCAT GCTGGCTTAT GCCCGCGAAA TGGTCGCCCT CAGCGACGAG GTCGGGAAAA GGCTGACAGG CAAGATGATC GAGGACCGCA TTCGCCTCGG CGTCGTCGAG GACTTCGCAG CTGGCCACCT GATCGACATT CTTAGTGCCT TCAGAGCCCA GAACCCGAAG GTCGAGATCG ACATCATTGT CGAGCCGAAT CGCCGCCTCG CCAGCCTGTT TGAAGACAGG AAGCTGGATC TCGTGGTTTG CGACATCACC TGCCTCTCGC GAAAACCGAC CCTGATCTGG ACCGAATATT TGATGTGGAC GGTGAGATCC GACTTTGTGG CGGATACGGA AAAACCGCTT CCGATCATCA TGTTCGAGGA GGAGTGTCCC TGGACGCTTC CGACGATTGC GGCTCTGTCC CAGCGAAACA TCAAGTGGAA GACGGCGTGC GTCGCATCGA CGCTGGTGGC CATGGCGACC GCGGTTCGCG TCGGTATCGG TATCGCGCCA ATGATGCTCA CGACGAAACC GGAGGGCTGC CGGACGCTTG ACCGATCGGC GGATCTGCCC GGTCCGGTGC GCATCGAGAT CGGTCTGTAT GCTCAATCCG AGTCGGCCGA AGGCGCGCGC TATCTTGTGG ACTTCATTTC GCGGCATACC GCCATATTGT CCAGCTAG
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Protein sequence | MLDLDSYLLR AFLTVAEIGT VNGAAVKLNR TQAAVSMQIR KLEELVGVTL FSRSSKGLEL TSHGQIMLAY AREMVALSDE VGKRLTGKMI EDRIRLGVVE DFAAGHLIDI LSAFRAQNPK VEIDIIVEPN RRLASLFEDR KLDLVVCDIT CLSRKPTLIW TEYLMWTVRS DFVADTEKPL PIIMFEEECP WTLPTIAALS QRNIKWKTAC VASTLVAMAT AVRVGIGIAP MMLTTKPEGC RTLDRSADLP GPVRIEIGLY AQSESAEGAR YLVDFISRHT AILSS
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