| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3861 |
|---|
| Symbol | |
|---|
| ID | 8014685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3932161 |
|---|
| End bp | 3934815 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644826431 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002977643 |
|---|
| Protein GI | 241206547 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR02302] conserved hypothetical protein TIGR02302 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.193877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCC CATCGAGGCA GAAGAAAGGC GCATTTGCCT ACCGTCCCTC GCTTGCCCGG
CTCGTGACGA CGAAACGACT GCTGGCGCGA ATCGTGCTCT TTTTCGAGCA ACTGCTGCCT
CCTTTGATGC CGGTACTGTC CGTCATCGCC TTTTATCTCT CTGCCTCCTG GTTCGGCCTC
TTCCGCAGCG TGCCGGACTG GCTGCGCATT CTGCTGCTCA TCGCCTTTGC CGCCGCTTTT
CTCATTTCGC TCCTCCCCTT CCGCACCCTG CGCTGGCCGA GGATCGCAGA AGCCGACCGC
ATGCTGGAGG AGCGCAACGG TCTGCCGCAC CAGCCGGTCA CCGTCCAGGA AGACGAGCCG
GCCTTCGATA CGCCCTTCGG CCGGGCGCTC TGGCGCGAGC ACCAGGCGCG CATGGCCGAA
AAGATCGCAG CGCTTGATAC CGGACTGCCG CGGCCTGATA TCGCCGCGCA TGACCGTTTC
GCGTTGCGCG CCGTCCCGGC GCTGCTGCTC GTCACGGCCT TCGGTTATTC ACTGTCGATC
AACGGCGGCT CGATCCGCGA CGCATTGCAG GCAGCACCCG AGCAGGTGGT CAGCGATCCG
GCAGTGCGCA TCGACGCCTG GGTGACGCCG CCTTCCTATA CCGGCCGAGC CCCGATCTAT
CTGACGGCCG ACGGCAGCGA GCAGGCGCCG ATCGGCATTC CGCAGTTTTC AGGCCTCACC
GTCCGCGTCA GCGGCGGAAA GACCGCCGAA AAGGTCGTGT TCCGCAAGGC GAACGGCGAG
GCCCAGGATA TTGCCGTGCA GGCGGATACC AAGCCGCAGC AGACGGCGGC ATCAGGCAGC
GAGCAGCAGA CAGCAGCCCC GGCCAGCCAG GCTCTCGTCG CCCAGACGCA TATGATGAAG
CTCCAGGAGA ACGGTGCACT CGAGGTCAAC GGCCGCCGCT GGAGCTTCGA CGTGCTCCCC
GACAAGGCGC CGGAGATTGC CTTCGACGGT TTGCCGAAGC CCAGCGTCAA CGGCGCGCTC
GAAATCGGTT TCACCGTCAA GGACGATTAC GGGGTCCAGG AGGCGCATGC CGAGATCGTC
CCCGTCGAAA CCGATCCGAC GGCAACGCCG CTCTATCCGC TGCCGGAATA CCGGCTGGAT
ATTCCCCGCC GCAACGCCCG CGACGCCAAG GGCGTGACCA GCCGGAACTT GACCGAACAT
CCGCTTGCCG GCAAGCGCGT GCGCATCACC CTCGTCGCCA AGGATGCCGC CGGCCAGACC
GGCCGCAGCC CGCCGCATGA GATGGTGCTG CCGTCGCGGC CCTTCAACGA GCCGCTTGCC
GCGGCCGTAG CTGAGGAGCG GCAGGTTTTC GCGCTCGATA CGCGCAAGAT GCCGCAGGCA
ATCGCCCTGA ACGAGGCGCT GACTATCCGC CCCGAGGAGA CGATCCCCAA GCTTACCAAC
TACTTGCTGC TCGAATCCGC CCTGACGCGC ATGAAGCTCG CCAGGGGCGA GGATGCGCTG
AAGGATACGG CCCAATATCT CTGGGAAATC GCCCTCGGCA TGGAGGACGG CGATCTATCG
CTCGCCGAGC GCAAGCTGCG CGAAGCCCAG CAGAAGCTTG CCGACGCGTT GGACCGCAAC
GCTCCCGACG CGGAGATCAA GGAGCTGATG GACGAGCTGC GCAAAGCGAT GCAGGACTAT
ATGACCGAGC TCGCCCAACG CATGCAGAAC GCGCCGATGC AGCCGAACCA GAACGCGCAG
AATATCCTGC GTCAGCAGGA CCTGGAACGG ATGATGGACC AGATCGAAAA TCTCGCCCGC
TCCGGCAATC GTGACGCCGC CCAGCAGATG CTGTCGGAAT TGCAGCGGAT GATGAACAAC
CTGCAGGCGG GCCGCCCGCA GCGAGGTCAG CAGGGCCAGG AAAACAGCGA GGCCCGCAAG
CAGATCGACA AGCTCGGTGA GATCCTGCGC GACCAGCAGA AGCTGATGGA ACAGACCTTC
CGGCTCGACC AGCAGCTCAG GGACCGCATG CAGCGCGGCG AGCCTGACAT GGGCGAGAAC
GATCCGCTGC TCGACGAGAT GAACCCCGGA GAGAACGGCG AGCCGCGGGA TCAGCAGCAG
GGCCAGCAAG GCAAAGAAGG CCAGCAGCCC TCCGACCAGA TGACGGCCGA GCAGCTGCGG
GAGGCGTTGA AACAGCTGCG CGCCCAGCAG GATGCGCTCG GCAAGCAGCT CGGCGAATTG
CAGAAGAGCC TCGGCGAGAT GGGCATGAAG CCCGGCCCCG GCTTTGGCCA GGCGCAGCGC
GAAATGGAAG GCGCCGGCCG AGAACTCGGC CAGGGACGTG GCCAACCGGC CGTCGAGGGC
CAGGGCCGCG CCCTGGAAGC GCTTCGCCAG GGCGCCCGCG ACATGATGAA CCAGATGATG
CAGGCGCAGC AGGGCCAGCA GGGTCAAGGT CCGAACGGCC AGGTGGGCCA GGGCGACCAG
AACGGCCGCG ACCCGCTCGG CCGGCCGCGC CGCCCCCAGG GGCCGGAGTT CGGCGACAAC
AGCGTGAAGG TGCCTGACGA AATCGACGTT CAGCGGGCGC GAGAAATCCT TGACGCGATC
CGCGAAAAGC TCGGCAACAA TCCGCCGCAG GAAATGGAAC GGCGCTATCT CGAACGACTG
CTGGACATCC AGTAG
|
|---|
| Protein sequence | MTSPSRQKKG AFAYRPSLAR LVTTKRLLAR IVLFFEQLLP PLMPVLSVIA FYLSASWFGL
FRSVPDWLRI LLLIAFAAAF LISLLPFRTL RWPRIAEADR MLEERNGLPH QPVTVQEDEP
AFDTPFGRAL WREHQARMAE KIAALDTGLP RPDIAAHDRF ALRAVPALLL VTAFGYSLSI
NGGSIRDALQ AAPEQVVSDP AVRIDAWVTP PSYTGRAPIY LTADGSEQAP IGIPQFSGLT
VRVSGGKTAE KVVFRKANGE AQDIAVQADT KPQQTAASGS EQQTAAPASQ ALVAQTHMMK
LQENGALEVN GRRWSFDVLP DKAPEIAFDG LPKPSVNGAL EIGFTVKDDY GVQEAHAEIV
PVETDPTATP LYPLPEYRLD IPRRNARDAK GVTSRNLTEH PLAGKRVRIT LVAKDAAGQT
GRSPPHEMVL PSRPFNEPLA AAVAEERQVF ALDTRKMPQA IALNEALTIR PEETIPKLTN
YLLLESALTR MKLARGEDAL KDTAQYLWEI ALGMEDGDLS LAERKLREAQ QKLADALDRN
APDAEIKELM DELRKAMQDY MTELAQRMQN APMQPNQNAQ NILRQQDLER MMDQIENLAR
SGNRDAAQQM LSELQRMMNN LQAGRPQRGQ QGQENSEARK QIDKLGEILR DQQKLMEQTF
RLDQQLRDRM QRGEPDMGEN DPLLDEMNPG ENGEPRDQQQ GQQGKEGQQP SDQMTAEQLR
EALKQLRAQQ DALGKQLGEL QKSLGEMGMK PGPGFGQAQR EMEGAGRELG QGRGQPAVEG
QGRALEALRQ GARDMMNQMM QAQQGQQGQG PNGQVGQGDQ NGRDPLGRPR RPQGPEFGDN
SVKVPDEIDV QRAREILDAI REKLGNNPPQ EMERRYLERL LDIQ
|
|---|
| |