Gene Rleg_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3587 
Symbol 
ID8014443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3621505 
End bp3621909 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content64% 
IMG OID644826152 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002977372 
Protein GI241206276 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.726576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0347651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCTT CGAACCCGAA GACCATGACC ATCAGACGCC CTGGCAGGGC GGTCCGCTCG 
CCGGAGGGCG TCGCAACCTC GCCTTTCTGG GTCGAGATGC TGCTCGAAGG CAGCGCCGAT
GGTGAGAACA CCGCAATGCG CGCCACGCTC GAACCCGGCA CCATCACCCG TTGGCACACC
CATCCCAGAG GCCAGTTGCT CTATGTGCTT TCGGGCCATG GGTTGGCGCA GACCGAGGGC
GGCCCGATCG AAGCATTGCG TCCCGGCGAT GCCGTCTGGT TTGCGCTCGG CGAGCGTCAC
TGGCATGGCG CGGCCGATGA CAGCCCCTTC AGCTATATCA GTATCCAGCC GAAGGAAAAC
GGCAGCGTCG TCGAATGGCT GCAACCGGTG GAGACACGGT CATGA
 
Protein sequence
MIASNPKTMT IRRPGRAVRS PEGVATSPFW VEMLLEGSAD GENTAMRATL EPGTITRWHT 
HPRGQLLYVL SGHGLAQTEG GPIEALRPGD AVWFALGERH WHGAADDSPF SYISIQPKEN
GSVVEWLQPV ETRS