Gene Rleg_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3503 
Symbol 
ID8014372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3538782 
End bp3539699 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID644826068 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002977288 
Protein GI241206192 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.284627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.304457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAC TGGTATCGGG TGGAACGGGT CTCGTCGGCC GGTATGTCGT CGAGGAACTG 
CTGGCCGCCG GATATCAGGT GATCGTCGGC GGGCGCCGCG CGCCGCTGCC GCGCCTCTTC
TCCCGCCCGG TCGAGTTCGC AGCGCTTTCG CTCGACCCCG ACAAGGATCA GATCGACGTC
TTCGACGACG CCTATTTCTT CGTCCACGCC GCCTTCAGCC ATGTTCCGGG CAAATATCGT
GGCGGCGAGG GCGACGATCC GAAGACCTTC CACAGGTTGA ACCTCGACGG CACCGTCCGG
CTTTTCGAAG CTGCCAAACG CGCCGGCACA CGCCGCTGCG TCTTTCTGTC CAGCCGCGCC
GCCTATGGCG AACATCCCGA GGGAACCGAA CTGACGGAGA CGATGCTGGC CAAGCCCGAA
ACACTTTACG GCCAGGTCAA GCTCGATGCC GAACGCGCGC TTGACCACCT CTCCACGCCG
GGTTTTGCCG GCGTCAGCCT GAGGGCAACC GGCGTCTATG GCGATCTCTC GCCGAACAAA
TGGGACGGCC TCATCGCCGA TTACCTCGCC GGCCGGCCGG TTGTTGCCCG TCGGGGAACG
GAAGTTCACG GCCGCGACCT CGGTCGGGCG GTGAGGCTGA TGCTGGAAAC GGAAAGCACC
CGCATCTCCG GCGAGGTCTT CAACGTCTCG GACATCTCGG TCGACACGCG CGATATCCTT
TCACCCATCC GTCGCGAGAC GGGCTGTCGG CACGCGCTGC CGCCCCCTCC CGACAGGGCC
GCACTCAATC CCATGAGCAC TGCTAAAATC CGCACGCTCG GCTGGGCACC CGGCGGAGCG
CCTCTATTCG AGGAGACGAT GCAGCAGCTG GCCGCTGCGC TGCCTAAATC CCCAAGACAC
AGGTCCACGC AAGCCTGA
 
Protein sequence
MKVLVSGGTG LVGRYVVEEL LAAGYQVIVG GRRAPLPRLF SRPVEFAALS LDPDKDQIDV 
FDDAYFFVHA AFSHVPGKYR GGEGDDPKTF HRLNLDGTVR LFEAAKRAGT RRCVFLSSRA
AYGEHPEGTE LTETMLAKPE TLYGQVKLDA ERALDHLSTP GFAGVSLRAT GVYGDLSPNK
WDGLIADYLA GRPVVARRGT EVHGRDLGRA VRLMLETEST RISGEVFNVS DISVDTRDIL
SPIRRETGCR HALPPPPDRA ALNPMSTAKI RTLGWAPGGA PLFEETMQQL AAALPKSPRH
RSTQA