Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3480 |
Symbol | |
ID | 8014351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3514045 |
End bp | 3514875 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644826044 |
Product | outer membrane adhesin like proteiin |
Protein accession | YP_002977265 |
Protein GI | 241206169 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01965] VCBS repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0866986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.203968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACC ACAAGCCGGT CGCAGGTGAC GTATACTTGC CTGTTTTCGA TATCAACGAC CCGATTAGCG GTGACATCCT CGAAAATACC AGTTCCACCG ATATCGACGG AGATGCAGTA CGCCTCAATT TCGTGAATGG ACAGCGCATT CCGCAACCGG CCAATGGATC CCCGGCCACA AGCACGACGA TCGAAGGAGA GTATGGTACG CTCACCGTTT ACTCCGACGG CAGCTACACC TACGCGCTCG ATCACTCCAA CCCGGTGGTC GCAGCGCTCG GACCGGGAGA TGAGCTGGTC GAAAAATTCA CCTTCAAGAT ATCAGACGGC AAAGGCGCCA CCGACGTCGG CGCGTTCAGT ATCGCAATAG ATCTGCCGGA ACGCGACGAT GTGTTCGCCA ACTTCGAGGA TGTTGGCCAA AGTGACTTCC CAACTGGTTA CAAAGGCTTC GATTGGGGCG CCTGGTACGA TGGTGACGAC GCTTCTGTGC GGGAGGAAGC GGATGGCAAC CACTATCTGG GAGGAGGCGT GTTCTGGACA CCCATCCAAG CCGCCGATGG CGGCAACTTT CAGATCGAGC AATTCAGTGT CGCAAACGGC ACATCGGACT ATGACAACGT TCTGACGATC GAAGGTAAGC TGGACGGCGA TACCGTATTC TTGGTCACGG TCAACGTCAC CGCCGACAGC ATTCATGACC CGCAAGTGAT CGATCTCAGC GCCTACGGCG AAATCGACTC TCTCGTGCTC GACACCGAAC CCGTCATCAA CGAAACGAGC GGCCCGGATT ATTACGGCGC GCAATACGAC AACTTTCATT TCATCGTTTG A
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Protein sequence | MANHKPVAGD VYLPVFDIND PISGDILENT SSTDIDGDAV RLNFVNGQRI PQPANGSPAT STTIEGEYGT LTVYSDGSYT YALDHSNPVV AALGPGDELV EKFTFKISDG KGATDVGAFS IAIDLPERDD VFANFEDVGQ SDFPTGYKGF DWGAWYDGDD ASVREEADGN HYLGGGVFWT PIQAADGGNF QIEQFSVANG TSDYDNVLTI EGKLDGDTVF LVTVNVTADS IHDPQVIDLS AYGEIDSLVL DTEPVINETS GPDYYGAQYD NFHFIV
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