Gene Rleg_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3480 
Symbol 
ID8014351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3514045 
End bp3514875 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content55% 
IMG OID644826044 
Productouter membrane adhesin like proteiin 
Protein accessionYP_002977265 
Protein GI241206169 
COG category 
COG ID 
TIGRFAM ID[TIGR01965] VCBS repeat 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0866986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.203968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACC ACAAGCCGGT CGCAGGTGAC GTATACTTGC CTGTTTTCGA TATCAACGAC 
CCGATTAGCG GTGACATCCT CGAAAATACC AGTTCCACCG ATATCGACGG AGATGCAGTA
CGCCTCAATT TCGTGAATGG ACAGCGCATT CCGCAACCGG CCAATGGATC CCCGGCCACA
AGCACGACGA TCGAAGGAGA GTATGGTACG CTCACCGTTT ACTCCGACGG CAGCTACACC
TACGCGCTCG ATCACTCCAA CCCGGTGGTC GCAGCGCTCG GACCGGGAGA TGAGCTGGTC
GAAAAATTCA CCTTCAAGAT ATCAGACGGC AAAGGCGCCA CCGACGTCGG CGCGTTCAGT
ATCGCAATAG ATCTGCCGGA ACGCGACGAT GTGTTCGCCA ACTTCGAGGA TGTTGGCCAA
AGTGACTTCC CAACTGGTTA CAAAGGCTTC GATTGGGGCG CCTGGTACGA TGGTGACGAC
GCTTCTGTGC GGGAGGAAGC GGATGGCAAC CACTATCTGG GAGGAGGCGT GTTCTGGACA
CCCATCCAAG CCGCCGATGG CGGCAACTTT CAGATCGAGC AATTCAGTGT CGCAAACGGC
ACATCGGACT ATGACAACGT TCTGACGATC GAAGGTAAGC TGGACGGCGA TACCGTATTC
TTGGTCACGG TCAACGTCAC CGCCGACAGC ATTCATGACC CGCAAGTGAT CGATCTCAGC
GCCTACGGCG AAATCGACTC TCTCGTGCTC GACACCGAAC CCGTCATCAA CGAAACGAGC
GGCCCGGATT ATTACGGCGC GCAATACGAC AACTTTCATT TCATCGTTTG A
 
Protein sequence
MANHKPVAGD VYLPVFDIND PISGDILENT SSTDIDGDAV RLNFVNGQRI PQPANGSPAT 
STTIEGEYGT LTVYSDGSYT YALDHSNPVV AALGPGDELV EKFTFKISDG KGATDVGAFS
IAIDLPERDD VFANFEDVGQ SDFPTGYKGF DWGAWYDGDD ASVREEADGN HYLGGGVFWT
PIQAADGGNF QIEQFSVANG TSDYDNVLTI EGKLDGDTVF LVTVNVTADS IHDPQVIDLS
AYGEIDSLVL DTEPVINETS GPDYYGAQYD NFHFIV