Gene Rleg_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3444 
Symbol 
ID8014318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3472563 
End bp3473165 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content60% 
IMG OID644826008 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002977229 
Protein GI241206133 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.700957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGAA GGCCAAGACG CAAGGCCGAG GAAACGCGGG AAGACATTCT CTCCATGGCG 
GAGATGCTGT TTCGCGAGCG CGGCTTCGTT GCGGTGTCGA TCGCCGATAT CGCCGGTGCG
CTCCACATGT CGCCCGCCAA TGTCTTCAAG CATTTCCGTT CCAAGGTGGC GCTCGTCGAT
GCGATCGCAG GACGCCATCT CGACGATGCT GCCGAGCGCT TCGCCGCCTT CGATGAGAAG
CTGCCGCCGA AGGAACAACT GCTCCGCTTC ATCCTGCGCC TGCTGGAAAG CCACCTGCAG
GACATCCAGA AGAACCCTTA TATCTTCGAA ATGGTGCTTT CGACGATCGA AGCCAAACTC
GAGGCCGGCA ATCGTTATCG CGCCCGCATC GAGGCAAAGC TCGGCGAGAT CATCCGCGAA
GGCATGGCGG AGGGAAGTTA TCATTGCCGC GATCCCGAAA GCGCGGCGCA TACGGTGGCA
GATGTCCTGG CCTGCGTGCT GCACCCTGTC CTGATCGCTC GCGACGACAA GGAGACGCTC
GTGCACCGCG CCGAAAAAAT CGTGTGTTTC GTCCATGCCG CACTGCAAAA TAGCGCTTGC
TAA
 
Protein sequence
MVRRPRRKAE ETREDILSMA EMLFRERGFV AVSIADIAGA LHMSPANVFK HFRSKVALVD 
AIAGRHLDDA AERFAAFDEK LPPKEQLLRF ILRLLESHLQ DIQKNPYIFE MVLSTIEAKL
EAGNRYRARI EAKLGEIIRE GMAEGSYHCR DPESAAHTVA DVLACVLHPV LIARDDKETL
VHRAEKIVCF VHAALQNSAC