Gene Rleg_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3427 
Symbol 
ID8014300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3449265 
End bp3450314 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content61% 
IMG OID644825985 
ProductABC transporter related 
Protein accessionYP_002977212 
Protein GI241206116 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTG TATCGCTTAA AGGCATCGAA AAACGCTTCG GCGCCGTCGA GGTCATCCGC 
GGCGTCGATC TCAGGATCGA TCCGGGCGAG TTCGTCGTAT TCGTCGGTCC GTCGGGTTGC
GGCAAGTCCA CCTTGCTGCG GCTGATTTCG GGGCTGGAAT ATCTCAGCGG CGGTGAGCTT
GCGATTGGCG GCCGGGTGGT CAACGAAGTG CCGGCTTCGA AACGCGGTGT TGCCATGGTC
TTCCAATCCT ATGCCCTCTA TCCGCACCTG ACCGTCCGGG ACAATATGGG TTTCGGGCTG
AAGGTCCGCA AAGTTCCGGC ACAGGAGCGT CAGAAGCGCG TCGATGAAGC AAGCGCCACG
CTGAAGCTCG AAGCATTGCT CGATCGCTAC CCCCGCGAGC TTTCCGGCGG TCAGCGGCAA
CGCGTCGCGA TCGGCCGGGC CATCGTCGGA AATCCCGATG TCTTCCTGTT CGACGAACCG
CTGTCGAACC TCGATGCAGA ATTGCGCGTG CACATGCGCT CTGAAATCGC CGCGCTGCAC
AAGCGGCTCT CCACGACGAT GATCTATGTA ACGCACGACC AGATCGAAGC GATGACGCTC
GCCGACAAGA TCGTCGTTCT GCGCGACGGC CGCGTCGAGC AGGTCGGCTC CCCCCGGGAC
CTATACGAGC GGCCGGCAAA TACCTTCGTG GCGCAGTTCA TCGGAAGCCC AAAAATGAAT
CTGCTGCCTG CAGATATCGC GCCTTTGCTG ACAGGCGCAA CGGCAATGGA TGCCGCCGCC
GAGACCATCG GGATAAGGCC GGAGCATCTG ACGGTCGTGG AACCTCGAGA CGGGACGCTA
CGCGGAACCG TCGGGCTTTG TGAATATACC GGGGCAGTAA CGCTGCTCCA CGTCAAGCTG
CCGGACGGGC ACGATTGCCT CGTCCTGCAC GACGGTCATG ACACGAAGGC GGGAATCCAA
ATAGGGCTCA CCGCCGATGT CTCGAAGGTG CACTTTTTCA AGGGCAACGG GCAGACAATA
AAGCAGACCG AACGAGGTCG GACTGCTTGA
 
Protein sequence
MSSVSLKGIE KRFGAVEVIR GVDLRIDPGE FVVFVGPSGC GKSTLLRLIS GLEYLSGGEL 
AIGGRVVNEV PASKRGVAMV FQSYALYPHL TVRDNMGFGL KVRKVPAQER QKRVDEASAT
LKLEALLDRY PRELSGGQRQ RVAIGRAIVG NPDVFLFDEP LSNLDAELRV HMRSEIAALH
KRLSTTMIYV THDQIEAMTL ADKIVVLRDG RVEQVGSPRD LYERPANTFV AQFIGSPKMN
LLPADIAPLL TGATAMDAAA ETIGIRPEHL TVVEPRDGTL RGTVGLCEYT GAVTLLHVKL
PDGHDCLVLH DGHDTKAGIQ IGLTADVSKV HFFKGNGQTI KQTERGRTA