| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3283 |
|---|
| Symbol | |
|---|
| ID | 8015783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3283191 |
|---|
| End bp | 3284414 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644825842 |
|---|
| Product | release factor H-coupled RctB family protein |
|---|
| Protein accession | YP_002977069 |
|---|
| Protein GI | 241205973 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03073] release factor H-coupled RctB family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.812621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.065367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAATT TCATTGGGAG CGAAAGCTCC CCGATGACGT CGTCGGCACA TCCGGCGGTC
ATCAATCGTT TCTTTTCCGG TAGCGCCTGG ATCGAAGGCG CCGCTTTAGA CCAACTTGAC
GAAATGTCCC GCCTGCCGGG TGTTATGGAA ATCGCCGCCT TTCCAGATCT GCACCCCGGA
AAATATGGTG CGACTGGCGT GGCATTGTTG TCGTCCCGGC TGCACCCGCT GTTGATCGGC
AATGATATCG GTTGCGGCAT GTCGCTCTTC GGCCTGGATC TTCCGTTGCG CAAACTGAAG
ATCGACAGGG CGGCGGAACG GCTTCGCCGG TTTGAAACGC AGGCGATCGG AGATGCCGCG
GAACTTCTCG CGGAGGCAGG TCTGTCCACC GATCTGACAC CCGGTGCGCT TGGCACGATC
GGCGGCGGCA ATCATTTCTG CGAGTTGCAG GCTGTGGAGG ATCTCGCCGA AGGCGGATCT
GCCGAGGGAC TCGATGATCA GGGGCTCTAT CTGCTGGTTC ATTCCGGTTC GCGCTCTCTT
GGTGCCACCA TATTCTCGGA GATGGTGGCC GCTCATTCGG GGCTCGCAGC CGGTCTTGCT
TCCGGTTCTG AGGCCGGCAC CGCCTGGCTT ATGCGCCATG ACCAGTGCGT TGCCTGGGCA
TCGTTGAACC GACGACTGAT CGCAGAACGG GCGGCCGCAG CGCTTCATGT CGATCTGCGT
CTCATCGCCG ACGTGCCGCA CAATCTCATT CGCCCGTCCG ATCGTGGGTT TGTGCACTAC
AAGGGTGCGG CAGCGGTCGT ATCGGGCAAA CTTGCGCCGA TTGCGGGATC TCGAGCGAGC
CTCAGTTATG TGGTTCGTCC GAGCGCTGGC GTTGCCCGTT CGCTGGATGG CATCTCTCAC
GGGGCCGGTC GCAAATATGA CCGCGCCACC ATGCACGGGC GTGTCGGCCG CAATCGCTCC
GAACGAGAAC AGCTGTTGCG CAATTCCTGG GGCGGTATCG CCATCTGCGA CGATCGCTCC
CTTGTCGTCG AGGAGGCGGC ATCCGCATAC AAGGATGCCG GGCAGGTGGT GACCGATCTG
GAAAATGAGA GCCTGGTCGT GAGGCTTGCC AGCTTTCGGC CGCTTGTCAC CTTCAAGAAG
GCGGTTGATG AAGCGGAAGT TGAGCAGCGC CGGCGAAAAC CTGAATATCG CAGGGAAGGA
GGACGTGGCC ATGAGCGCTA TTGA
|
|---|
| Protein sequence | MGNFIGSESS PMTSSAHPAV INRFFSGSAW IEGAALDQLD EMSRLPGVME IAAFPDLHPG
KYGATGVALL SSRLHPLLIG NDIGCGMSLF GLDLPLRKLK IDRAAERLRR FETQAIGDAA
ELLAEAGLST DLTPGALGTI GGGNHFCELQ AVEDLAEGGS AEGLDDQGLY LLVHSGSRSL
GATIFSEMVA AHSGLAAGLA SGSEAGTAWL MRHDQCVAWA SLNRRLIAER AAAALHVDLR
LIADVPHNLI RPSDRGFVHY KGAAAVVSGK LAPIAGSRAS LSYVVRPSAG VARSLDGISH
GAGRKYDRAT MHGRVGRNRS EREQLLRNSW GGIAICDDRS LVVEEAASAY KDAGQVVTDL
ENESLVVRLA SFRPLVTFKK AVDEAEVEQR RRKPEYRREG GRGHERY
|
|---|
| |