Gene Rleg_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3233 
Symbol 
ID8014125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3238724 
End bp3240148 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content57% 
IMG OID644825794 
Productendo-1,4-beta-xylanase protein (exopolysaccharide export) 
Protein accessionYP_002977021 
Protein GI241205925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCA ACCTCATCAA TAAGCGGGTC TTGCGAGAGG TTTTGCTTTT TGCCTTCATC 
GGCCTCGTTA TATTGACGCT CATACCGTTC GGGAGCGTTA CACCCTTTCC CTTCGCCTTC
GCCGCGATCG GGATGTTTGT CCTCGCCATC ATTTCGGGAT TGCTGTTTAG AGAGCCGAGA
CAAAGCAGAT GGGTTTTCAG TATCGCTTTG TTTCTACTCG TCGTCCTGGC GGGCTGGGCG
TTCATCCAAA CCACCGAACT GCCCGCCAAT TGGTTGGCGA ATCCCGCCTG GAATGCTGCG
CGTGACCTTG CAGGTGCCCA GTCCGCGGCG ATCTCGGTCG AACCGGCCGA CACGCTCGCG
TCGATCCTCT GGGTCGCGCT GCCTTTCGTC ACGTTCCTGA CCGGGCTTCT CTTATGCGAT
ACCGATCAGC GCGCGAGGAA AGTGCTCACC GGGCTCGGGC TTACGGCGGG TATCATCGCT
GTTTTCGGCC TGATGCAGTT TTTGCTGTTT CCCAAAATTT TGATCGTCGT CGAAAAACAC
GCCTACCTCG ACAGCCTGAC TGCGGTCTTC GTCAACCGTA ATACTGCTGC GACCTTCCTC
GGGCTTGGAA CGCTGCTGAT GCTGACCTTG GTCAGGGATA TTACCCGAGC CTATTCGAAG
TATCCGCCCG GCGAGCCGGG CCGAAACGCT CTCCTCTTGA GATCGTGGAT CTATATCCTG
TTCTTATGCG CATGCTTCAC CGCGCTGATG CTGAGCCGCT CGCGCGCCGG GATATTTGCG
ACCTTTGTTG CCGCTCTCGT CTATTTTCCA TGGCTTGTCA TTAATTGGAA CGGCTCGAGG
CGTCATCTGA GACCGGCGCC AAGATGGCGT TCGCTGCTGA AGCTCCTCTC GGCGATTGCT
TTCGTCGTAC TGTTGCTGAC CGTGTTTGCG GGCCAGGCGA TTTTGCGTGC GCAAGAGCGG
CGACTCGAGG ATGACGATCG GTTTTGCATT CTGCCGGGCA TATGGCGTGC CGTCTCGGAT
CATTGGTTGA CGGGAACGGG GCTCGGAACC TTCCGGACCG TGTTTTCCGC CTACCGCGAT
CCGGCTTGCG GTATTTTTGG AGTCTTCGAC CGTGCGCATA ATTTCTATCT CGAAGGATTT
CTGGGCCTCG GAATATTGTT CCCGATTGCG ACAGTCCTTG CCTTGTCGGT GCTTGCCAGA
GTGTTCTGGC ACGGGCTCGC CCAAAGACGG CGTCTCAGGC ACTATGTTCT TCTTGGCCTA
GCGGCGACCG TTTTGGTCGC CCTTCATGCG GCGGTCGATT TTTCGCTGCA GATACCGGGT
TTTGCTGTGT TTTACTCCGC CTTCCTGAGT GCGGTTGTCG CGATATGTCT CGGGCGTAGC
AACGGAGAGG CGGACATGGC ATATGAGCGG CCGTTAACCA CGTAA
 
Protein sequence
MFSNLINKRV LREVLLFAFI GLVILTLIPF GSVTPFPFAF AAIGMFVLAI ISGLLFREPR 
QSRWVFSIAL FLLVVLAGWA FIQTTELPAN WLANPAWNAA RDLAGAQSAA ISVEPADTLA
SILWVALPFV TFLTGLLLCD TDQRARKVLT GLGLTAGIIA VFGLMQFLLF PKILIVVEKH
AYLDSLTAVF VNRNTAATFL GLGTLLMLTL VRDITRAYSK YPPGEPGRNA LLLRSWIYIL
FLCACFTALM LSRSRAGIFA TFVAALVYFP WLVINWNGSR RHLRPAPRWR SLLKLLSAIA
FVVLLLTVFA GQAILRAQER RLEDDDRFCI LPGIWRAVSD HWLTGTGLGT FRTVFSAYRD
PACGIFGVFD RAHNFYLEGF LGLGILFPIA TVLALSVLAR VFWHGLAQRR RLRHYVLLGL
AATVLVALHA AVDFSLQIPG FAVFYSAFLS AVVAICLGRS NGEADMAYER PLTT