Gene Rleg_3099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3099 
Symbol 
ID8014007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3097194 
End bp3098297 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID644825666 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002976894 
Protein GI241205798 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.419035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCA AGACATTGAC GGCGACCCTC GTCGCGTCAC TCGCCTTTGC GCCGCTTGCC 
TATGCCGATA TCACCATCGG CCTGATCGCG CCGCTGACCG GCCCGGTCGC CGCCTATGGC
GACCAGGTGA AGAATGGTGC GCAGACCGCC GTCGACGAAA TCAACAAGAA GGGCGGAATT
CTCGGCGAGA AGGTCGTCCT CGAACTGGCC GACGATGCCG GCGAACCGAA ACAGGGCGTT
TCCGCCGCCA ACAAGGTCGT CGGCGACGGC ATCCGCTTCG TCGTCGGCCC GGTAACCTCG
GGCGTCGCCA TTCCCGTTTC GGACGTGCTT GCTGAAAACG GCGTGCTGAT GGTTACCCCG
ACCGCGACGG CCCCCGACCT CACCAAGCGT GGTCTCACCA ATGTGCTGCG CACCTGCGGC
CGCGACGACC AGCAGGCCGA AGTCGCCGCC AAATATGTGC TGAAGAATTT CAAGGACAAG
CGCGTCGCCA TCGTCAACGA CAAGGGCGCC TACGGCAAGG GCCTCGCAGA TGCCTTCAAG
GCGACGCTGA ACGCCGGCGG CATCACCGAA GTCGTCAATG ACGCGATCAC GCCTGGCGAC
AAGGATTTCA GCGCGCTCAC CACCCGCATC AAGTCCGAGA AGGTCGACGT GGTCTATTTC
GGCGGCTACC ATCCGGAAGG CGGGCTGCTC GCCCGCCAGC TGCATGACCT CGCCGCCAAC
GCGACGATCA TCGGCGGCGA CGGACTCTCC AACACCGAAT TCTGGGCAAT CGGCACGGAT
GCGGCAGGAG GCACGATCTT CACCAACGCT TCGGACGCCA CCAAGAGCCC GGATTCCAAG
GCCGCAGCCG GCGCGCTCGC CGCCAAGAAC ATCCCGGCCG AGGCCTTCAC GCTGAACGCT
TATGCCGCCG TCGAAGTGCT GAAGGCCGGC ATCGAGAAGG CCGGCAGCGC CGAGGATGCG
GAAGCCGTCG CGGCCGCGCT GAAGGGCGGC GAAGAAATCC CGACCGCCAT CGGCAAGGTC
ACCTACGGCG AGACCGGCGA CCTCACCTCG CAGAGCTTCT CGCTCTACAA GTGGGAAGCC
GGCAAGATCG TCGCCGCCGA GTAA
 
Protein sequence
MTLKTLTATL VASLAFAPLA YADITIGLIA PLTGPVAAYG DQVKNGAQTA VDEINKKGGI 
LGEKVVLELA DDAGEPKQGV SAANKVVGDG IRFVVGPVTS GVAIPVSDVL AENGVLMVTP
TATAPDLTKR GLTNVLRTCG RDDQQAEVAA KYVLKNFKDK RVAIVNDKGA YGKGLADAFK
ATLNAGGITE VVNDAITPGD KDFSALTTRI KSEKVDVVYF GGYHPEGGLL ARQLHDLAAN
ATIIGGDGLS NTEFWAIGTD AAGGTIFTNA SDATKSPDSK AAAGALAAKN IPAEAFTLNA
YAAVEVLKAG IEKAGSAEDA EAVAAALKGG EEIPTAIGKV TYGETGDLTS QSFSLYKWEA
GKIVAAE