| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2956 |
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| Symbol | |
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| ID | 8013881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 2944600 |
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| End bp | 2946657 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644825526 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_002976754 |
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| Protein GI | 241205658 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.661846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.765968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA AGGTCAAAGA GAACGAAGAC GCGGAAGTCG AACGCGACGG CGCAAGCGAC
GGCCCTCTTC TCGATCTTTC CGACGACGCG GTCAAGAAGA TGATCAAAGC CGCCAAGAAG
CGCGGCTATG TGACCATGGA CGAGCTCAAC GCAGTCCTGC CGTCCGAAGA AGTGACGTCC
GAGCAGATCG AAGACACGAT GTCGATGCTG TCCGACATGG GCATCAACGT CATCGAGGAC
GAGGAAGCCG AGGAAGCCGG TGCTTCCGGC AGCAGCGATG ACGATGACGC CGGCAGCGAC
GAGGAGAGCG AAGGCGGCGA ACTCGCGCCT TCGAGCGGCA CGGCGCTGGC GGCCGCCAAG
AAGAAAGAAC CGACCGACCG TACCGACGAT CCGGTTCGCA TGTACCTGCG CGAGATGGGC
TCGGTCGAGC TTCTGTCCCG CGAGGGCGAA ATCGCGATTG CCAAGCGCAT CGAGGCCGGC
CGCGAGACGA TGATCGCGGG CCTCTGTGAG AGCCCGCTGA CCTTCCAGGC GCTGATCATC
TGGCGCGACG AACTCAACGA AGGCACGACG CTGCTGCGCG AGATCATCGA TCTCGAAACG
ACCTATTCCG GCCCTGAAGC CAAGGCTGCG CCGCAGTTCC AGAGCCCGGA GAAGATCGAA
GCCGATCGCA AGTTAGCAGA AGAGAAGGAA AAGACCCGCC GCGCCCGCTC CGGCGACGAC
GACATCACCG ATGTCGGCGG CGAAGGCCTG CCTGCCGAGG AGGAGGAAGA GGACGAGGAC
GAATCCAACC TTTCGCTGGC GGCAATGGAA GCCGAGCTTC GCCCGCAGGT GATGGAGACG
CTGGATACGA TCGCCGAGAC CTACAAGAAG CTGCGCAAGC TGCAGGACCA GCAGGTCGAG
CAGCGCCTGT CGGCTTCCGG CACGCTGTCC ACCGCCCAGG AGCGCCGTTA CAAGGAACTC
AAAGATGAGC TGATCAAGGC CGTCAAATCT CTGTCCTTGA ACCAGAACCG CATCGACGCC
CTGGTCGAGC AGCTCTACGA CATCAACAAG CGCCTCGTTT CCAACGAGGG CCGCCTGCTG
CGTCTGGCCG AATCCTACGG CGTCAAGCGC GACTCTTTCC TGGAGCAGTA TCAGGGCGCC
GAACTTGATC CGAACTGGAT GAAGTCGATC GGCAATCTGG CCGCCCGCGG CTGGAAGGAA
TTCGCCAGGG GCGAAAACAC GACGATCCGC GACATCCGCC AGGAAATCCA GAATCTGGCG
ACCGAGACTG GTATCTCGAT CTCGGAATTC CGCCGCATCG TGCATATGGT GCAGAAGGGC
GAGCGCGAAG CGCGCATCGC CAAGAAGGAA ATGGTCGAAG CGAACCTTCG CCTGGTCATC
TCCATCGCCA AGAAGTATAC GAACCGCGGC CTGCAGTTCC TCGACCTCAT TCAGGAAGGC
AATATCGGCC TGATGAAAGC GGTCGACAAG TTCGAATACC GCCGCGGCTA CAAGTTCTCG
ACCTATGCGA CATGGTGGAT CCGTCAGGCG ATCACCCGTT CGATCGCCGA CCAGGCTCGC
ACGATCCGCA TTCCGGTGCA CATGATCGAG ACGATCAACA AGATCGTCCG GACATCGCGC
CAGATGCTGC ACGAGATCGG CCGCGAGCCG ACGCCGGAAG AACTGGCCGA AAAGCTGGCC
ATGCCGCTCG AAAAGGTCCG CAAGGTCCTG AAGATCGCCA AGGAGCCGAT CTCGCTCGAA
ACCCCTGTTG GTGACGAAGA GGATTCGCAT CTCGGCGACT TCATCGAGGA CAAGAACGCG
CTGCTGCCGA TCGACGCCGC CATCCAGGCG AACCTGCGCG AAACGACGAC CCGTGTTCTC
GCCTCGCTGA CGCCGCGCGA AGAGCGTGTG CTGCGCATGC GCTTCGGCAT CGGCATGAAC
ACGGATCACA CACTCGAAGA AGTCGGCCAG CAGTTCTCGG TCACCCGCGA ACGTATCCGC
CAGATCGAGG CGAAGGCGCT GCGCAAGCTG AAGCATCCGA GCCGCTCCAG AAAGCTGAGA
AGCTTCCTCG ACAGCTAA
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| Protein sequence | MATKVKENED AEVERDGASD GPLLDLSDDA VKKMIKAAKK RGYVTMDELN AVLPSEEVTS
EQIEDTMSML SDMGINVIED EEAEEAGASG SSDDDDAGSD EESEGGELAP SSGTALAAAK
KKEPTDRTDD PVRMYLREMG SVELLSREGE IAIAKRIEAG RETMIAGLCE SPLTFQALII
WRDELNEGTT LLREIIDLET TYSGPEAKAA PQFQSPEKIE ADRKLAEEKE KTRRARSGDD
DITDVGGEGL PAEEEEEDED ESNLSLAAME AELRPQVMET LDTIAETYKK LRKLQDQQVE
QRLSASGTLS TAQERRYKEL KDELIKAVKS LSLNQNRIDA LVEQLYDINK RLVSNEGRLL
RLAESYGVKR DSFLEQYQGA ELDPNWMKSI GNLAARGWKE FARGENTTIR DIRQEIQNLA
TETGISISEF RRIVHMVQKG EREARIAKKE MVEANLRLVI SIAKKYTNRG LQFLDLIQEG
NIGLMKAVDK FEYRRGYKFS TYATWWIRQA ITRSIADQAR TIRIPVHMIE TINKIVRTSR
QMLHEIGREP TPEELAEKLA MPLEKVRKVL KIAKEPISLE TPVGDEEDSH LGDFIEDKNA
LLPIDAAIQA NLRETTTRVL ASLTPREERV LRMRFGIGMN TDHTLEEVGQ QFSVTRERIR
QIEAKALRKL KHPSRSRKLR SFLDS
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