| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2405 |
|---|
| Symbol | |
|---|
| ID | 8013390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 2407406 |
|---|
| End bp | 2410198 |
|---|
| Gene Length | 2793 bp |
|---|
| Protein Length | 930 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644824986 |
|---|
| Product | type III restriction protein res subunit |
|---|
| Protein accession | YP_002976216 |
|---|
| Protein GI | 241205120 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.752692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0809494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACC TCGCTTTTCA GGGCACGTGG CGAGCATATC AGCAGAAGAT ACTTGATGAT
CTTGCAAATC TCATCGGCGA TGACGGATTG CATATTGTCG CGGCACCCGG CTCCGGTAAA
ACGGTTTTAG GTCTTGAAGT GATGTGCAGG CTCGGCGAGG CGACTTTGAT TCTGGCTCCG
AGCAAGACCA TCCGGGACCA ATGGGCGCAT CGGCTGCGCA CGATGTTCCT GCCCCCCGAC
CTTGCGGAAC CGGAGTGGAT TTCCCACGAT GTGAGAGCGC CCGGAACCGT CACGATCATC
ACCTATCAAG CTCTGCATGC GGCGTTCTCG GGCCATCCGT CCGAAGAAGA AGTCCTCGAC
GGTGAAGAGG AGGGCAGCGA CGGGGCGGAA TCCGGCGAAC CAGGCAAGCA GGAAACGGAG
AAGGCGAGAA AGAAAATCAT CGCGAAGCTG CGCGAGGAGA AGGTTCGCAC CCTTGTGCTC
GATGAAGCGC ACCATCTTAG AAACGAGTGG TGGAAGGCGC TGACGATGCT CAAGGAAGCA
CTAGGCCAAC CCACTGTCGT CGCGCTGACA GCTACGCCTC CTTATGATGT AGATCCTCAG
GAATGGGACC GCTATCAGGC GCTTTGCGGG CCGATCGACG GTGAAATTTC CGTGCCGGAA
CTTGTGTTGC AAGGCGATCT TTGCCCGCAT CAGGATTATG TCCACTTCAG CCTGCCGAGT
GCGCTGGAAG CACAGAAGCT GGCCGAGTTT CGCGCGCAGA TCGGAGACTT CATTGAAACG
CTGCTTGAGA GTGCAGAATT CAAAGAGGCA ATTCTGCGCC ATCCATGGAT TACGCAGCCG
ATCGAGAATG TGGAGCATAT ACTGGACGAT GCACGCTTTT TCTCCAGCAT GCTCATCTTC
CTGAATTCCC AATATGTCGA CCTGCCGCAG TCGACTCTCG ACATTCTCGG CGTCAAGGTG
CGTGAAATAC CGGATCTGAC GCTTCAATGG ATAGAGGTAT TGCTGAACGG CGTTATCTAC
ACCTATCGCA ATGATTTCGA AGAAGCTGAA CAGGCAATCC GCTGCCAGCA AGACAGGCTG
AGGGAAATTA GGGCAGTGGA GCACAGCAGA GTGCGACTGA CTGATCCACG ATCGGTTCAG
AAGCTGCTGG TATCAAGCGC GAGCAAGCTA AACGCGATCG TCGATATTAC CCGGCTCGAA
AGCGCGTCGA TGCGTGACGA ACTCCGTATG GTTATCCTTT CCGACTATAT AAGGAAGGAT
GCGCTGCCCA CTGCCCCCGC GGACCTTCAG CCCATCGAGA GAATGGGCGT CGTGCCAATC
TTCGAGACGC TGCGGCGGTC CGAACTTGAT CTCAAGCTTG GAATTCTGAC CGGGAGTCTG
GTTGTCATTC CGGCGGGGTC AAAAGGAATT CTTGACGAGA TCGCAGACCG TCTTGGTATA
GGTGCAGAAC ATATCCGTTA TCAACAGACG GCATTCGATG CCGGCTTTCT GAGCGTGGAA
CTTGGCGGCG AGCTGAGCCG CAATATTGTC CATATGATCA CTGAACTGTT CAGTCGCGGC
GGGATCACGG TCCTGGTCGG CACCCAAGCT TTGCTGGGTG AAGGATGGGA CGCACCGTCC
GTAAACACTT TGATCCTGGC AAGTACGGTG GGATCATACG TGCTCTCCAA TCAGATGCGC
GGTCGTGCCA TTCGCATCGA TCCTCGAAGC CCTCAGAAGG CCGCGAACGT CTGGCATCTG
GCGGTCATCG ACCCTGAAAA GCTCGAGCAG AGAATACCGC TGCGCTTCGG GAGGAAATCG
ACCGACAGAA AAGCGCCCGA TCCCTATGAC ACCATGACAA TAGACCTGGG CAGCGACGTC
GATGCGCTAA AACGCCGATT TTACGCGTTT GAAGCTTTGT CCTTCGGCGA GCCTCCGCTG
ATCCAAAGCG GTTTTCAACG ATTGATGCTG GGTACTGCCA AATGGAATGC GCGCGGTGTT
GATGACATCA ACAAAATGAT GGAACGGAGG GCTGCAGACC GCAAATCACT GAAATTCCGC
TGGCATAGCG CGCTGCACAG CAAACGCGCC GTTGCGAGGA TGCAAGAAAC ATTGGAGAGC
AACTATGCCC CTAAGGGGCT AGTTAACTGG AATACGACAA AGTTTCTGTT TGCGCACAGC
GCCGCGCTCG CCGGCATGAT CTTGAACGGA TTTTTGCACA GCTTTCGCGT TACGCACATC
CGATCGCTCC AACAACTGGA GTTGGTCCTG TTCGTTATGT TCGCAATACT GGCCATCTTC
TGCTTGCCGG GTGCACTCAA AGCTAGTCTG TTGCTGCTGC GGAACGGCTC CCTGGAAGGG
AGCATGGAGC AAGTGGGAAT AACCGTTCTG GAGACGCTGC ATCATATGGG CGTCATAAGG
ACCGAATTGG GAAAAGTGAG TGTCGAGGCG ACGCTCGACC AAAACGGCAT GATTTACTGC
CGGCTTGAGG GTGCCACGAC AATTGAGCGG TCCCGCTTTC TCGACGCTCT ACGGGAAGTC
CTCATTCCCC CACAGAATCC CCGCTACATT CTCGTCAGGT CGTCAAAATT CTGGCGGCTG
AACCGGGTGG ATTATCATGC AGTCCCGTCG ATCATCGGCC GGAAAAGGGA GGATGCCATA
TATTTCGCCC AGCTGTGGAA TCGTTACGTC GGTTATTCGG AACTTGTATA CACGCGCAGT
GCCCAGGGTC GCCTGAAACT GCTCCAATTC CGCGCGAAGT CATTCGCTTC TGCGTTTACA
AGGAAAACCG ATAGAATTAG CCGGTGGGAG TAA
|
|---|
| Protein sequence | MKDLAFQGTW RAYQQKILDD LANLIGDDGL HIVAAPGSGK TVLGLEVMCR LGEATLILAP
SKTIRDQWAH RLRTMFLPPD LAEPEWISHD VRAPGTVTII TYQALHAAFS GHPSEEEVLD
GEEEGSDGAE SGEPGKQETE KARKKIIAKL REEKVRTLVL DEAHHLRNEW WKALTMLKEA
LGQPTVVALT ATPPYDVDPQ EWDRYQALCG PIDGEISVPE LVLQGDLCPH QDYVHFSLPS
ALEAQKLAEF RAQIGDFIET LLESAEFKEA ILRHPWITQP IENVEHILDD ARFFSSMLIF
LNSQYVDLPQ STLDILGVKV REIPDLTLQW IEVLLNGVIY TYRNDFEEAE QAIRCQQDRL
REIRAVEHSR VRLTDPRSVQ KLLVSSASKL NAIVDITRLE SASMRDELRM VILSDYIRKD
ALPTAPADLQ PIERMGVVPI FETLRRSELD LKLGILTGSL VVIPAGSKGI LDEIADRLGI
GAEHIRYQQT AFDAGFLSVE LGGELSRNIV HMITELFSRG GITVLVGTQA LLGEGWDAPS
VNTLILASTV GSYVLSNQMR GRAIRIDPRS PQKAANVWHL AVIDPEKLEQ RIPLRFGRKS
TDRKAPDPYD TMTIDLGSDV DALKRRFYAF EALSFGEPPL IQSGFQRLML GTAKWNARGV
DDINKMMERR AADRKSLKFR WHSALHSKRA VARMQETLES NYAPKGLVNW NTTKFLFAHS
AALAGMILNG FLHSFRVTHI RSLQQLELVL FVMFAILAIF CLPGALKASL LLLRNGSLEG
SMEQVGITVL ETLHHMGVIR TELGKVSVEA TLDQNGMIYC RLEGATTIER SRFLDALREV
LIPPQNPRYI LVRSSKFWRL NRVDYHAVPS IIGRKREDAI YFAQLWNRYV GYSELVYTRS
AQGRLKLLQF RAKSFASAFT RKTDRISRWE
|
|---|
| |