Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1988 |
Symbol | |
ID | 8013024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1985619 |
End bp | 1986443 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644824575 |
Product | beta-lactamase domain protein |
Protein accession | YP_002975807 |
Protein GI | 241204711 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.885217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0198893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCTACC GGCGGCGTTT CACCATTCTC GGCTGTTCGT CGTCACCGGG CGTGCCCCGC ATCACCGGCG ACTGGGGCGC CTGCAATCCC GACAATCCGA AGAACCGGCG CACGCGCGCC GCCTTCATGG TGCAGCAATT CGCACCCGAT GGCGGTGTCA CCACCGTCGT CATCGACACC GGGCCGGATT TTCGCGAGCA GATGATCAGG TCAGGGGCCG ACCATGTCGA TGCCGTGCTC TACAGCCATC CGCATGCCGA TCATATTCAT GGCATCGACG ATCTGCGCGG CTATTTTCAC AATACCCGCC GCCGGGTGCC GATCTTTGCC GACCAATTTA CCATGGACAG GCTGCGGGAA GCCTTCGGCT ACTGCCTGGC AACGCCGCCG GGCAGCAATT ACCCGCCGAT CGTGCTGCCG ATCGTCATCG AAAACCTCGA CGCGCCCTTG GAAATTCACG GTCCCGGAGG CACTATCGCT TTCCATCCCC ATATCCAGCA GCATGGCGAC ATCCACTCGC TCGGCTTCCG GATCGGCGAT GTGGCTTATT GCAGCGATAT CAGCGATTTC CCGCCGCAGA CCGTCGAGAA GCTTCAGAAC CTCGACGTGC TGATCATCGA CGCGCTGCAA TATACCTACC ATCCGAGCCA TCTGTCGCTG GAACAGTCGC TCGACTGGAT CGGCCGGCTG AAGCCGAAAC AGGCGATCCT CACCCATATG CACACGCCGC TCGACTACGA CGTGGTGATG GCCGAGACGC CGGACCATGT GGTGCCGGCG TATGACCAAA TGAGTTTCGA GACCGAGGTC AGGCTTAAAG CTTGA
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Protein sequence | MLYRRRFTIL GCSSSPGVPR ITGDWGACNP DNPKNRRTRA AFMVQQFAPD GGVTTVVIDT GPDFREQMIR SGADHVDAVL YSHPHADHIH GIDDLRGYFH NTRRRVPIFA DQFTMDRLRE AFGYCLATPP GSNYPPIVLP IVIENLDAPL EIHGPGGTIA FHPHIQQHGD IHSLGFRIGD VAYCSDISDF PPQTVEKLQN LDVLIIDALQ YTYHPSHLSL EQSLDWIGRL KPKQAILTHM HTPLDYDVVM AETPDHVVPA YDQMSFETEV RLKA
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