Gene Rleg_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1988 
Symbol 
ID8013024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1985619 
End bp1986443 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content61% 
IMG OID644824575 
Productbeta-lactamase domain protein 
Protein accessionYP_002975807 
Protein GI241204711 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.885217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0198893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTACC GGCGGCGTTT CACCATTCTC GGCTGTTCGT CGTCACCGGG CGTGCCCCGC 
ATCACCGGCG ACTGGGGCGC CTGCAATCCC GACAATCCGA AGAACCGGCG CACGCGCGCC
GCCTTCATGG TGCAGCAATT CGCACCCGAT GGCGGTGTCA CCACCGTCGT CATCGACACC
GGGCCGGATT TTCGCGAGCA GATGATCAGG TCAGGGGCCG ACCATGTCGA TGCCGTGCTC
TACAGCCATC CGCATGCCGA TCATATTCAT GGCATCGACG ATCTGCGCGG CTATTTTCAC
AATACCCGCC GCCGGGTGCC GATCTTTGCC GACCAATTTA CCATGGACAG GCTGCGGGAA
GCCTTCGGCT ACTGCCTGGC AACGCCGCCG GGCAGCAATT ACCCGCCGAT CGTGCTGCCG
ATCGTCATCG AAAACCTCGA CGCGCCCTTG GAAATTCACG GTCCCGGAGG CACTATCGCT
TTCCATCCCC ATATCCAGCA GCATGGCGAC ATCCACTCGC TCGGCTTCCG GATCGGCGAT
GTGGCTTATT GCAGCGATAT CAGCGATTTC CCGCCGCAGA CCGTCGAGAA GCTTCAGAAC
CTCGACGTGC TGATCATCGA CGCGCTGCAA TATACCTACC ATCCGAGCCA TCTGTCGCTG
GAACAGTCGC TCGACTGGAT CGGCCGGCTG AAGCCGAAAC AGGCGATCCT CACCCATATG
CACACGCCGC TCGACTACGA CGTGGTGATG GCCGAGACGC CGGACCATGT GGTGCCGGCG
TATGACCAAA TGAGTTTCGA GACCGAGGTC AGGCTTAAAG CTTGA
 
Protein sequence
MLYRRRFTIL GCSSSPGVPR ITGDWGACNP DNPKNRRTRA AFMVQQFAPD GGVTTVVIDT 
GPDFREQMIR SGADHVDAVL YSHPHADHIH GIDDLRGYFH NTRRRVPIFA DQFTMDRLRE
AFGYCLATPP GSNYPPIVLP IVIENLDAPL EIHGPGGTIA FHPHIQQHGD IHSLGFRIGD
VAYCSDISDF PPQTVEKLQN LDVLIIDALQ YTYHPSHLSL EQSLDWIGRL KPKQAILTHM
HTPLDYDVVM AETPDHVVPA YDQMSFETEV RLKA