Gene Rleg_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1896 
Symbol 
ID8012946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand+ 
Start bp1881610 
End bp1882224 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID644824485 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002975717 
Protein GI241204621 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.280079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.637354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGACTT CTCAGAGCCA TCTTGCCTAT CTCGCGCTGG AGCATCTGAT CGTGACGCTG 
GCGCTGAAGC CCGGCGCGCT TGTCACCGAA AAACAGCTGA TCGATATGGC GGGCCACGGG 
CGTACGCCGG TGCGCGAGGC AATCCAGAAG CTCGCCTGGC AGGGACTGAT CCTGGTGAAG 
CCGCGCGTCG GGCTGCAGGT CGCCGAGATC GCGCCGGAGG ATCATGGCAA TGTCATGCAG 
GTGCGTCGTG AGCTGGAGCC GATCGCGGCA AGCCTTGTCG CCGAACATGC GAGCGACGAA 
CAGCGCGCGC GTCTCCTCGA CTGCGCCCGC GCGATGGAGG AATGCGCCGT TAACGGCGAT 
CTCGACGGCT TCTTCGCCGC CGACAAGGCC TTCGACGAAA TCCTCGAGGA TGCCTGCCCG 
AACGGCTTCA TCACGGCAGC ACTCGGCCCG GTGCAGACGC ATTCACGTCG CCTCTGGTAC 
TCCAAGGCAA GCCCGGAGCG CATGGACCGC GCCATCGCGC TGCACGTCGC CGTCATCCGC 
GCCATCCATC AGGGCAGGCC GGATGAAGCG CGCGCCACCA TGGCGGTGCT GATCGATTAC 
CTCAGCCACA CATAG
 
Protein sequence
MQTSQSHLAY LALEHLIVTL ALKPGALVTE KQLIDMAGHG RTPVREAIQK LAWQGLILVK 
PRVGLQVAEI APEDHGNVMQ VRRELEPIAA SLVAEHASDE QRARLLDCAR AMEECAVNGD 
LDGFFAADKA FDEILEDACP NGFITAALGP VQTHSRRLWY SKASPERMDR AIALHVAVIR 
AIHQGRPDEA RATMAVLIDY LSHT