Gene Rleg_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1553 
Symbol 
ID8012633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1532635 
End bp1533603 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content61% 
IMG OID644824139 
Productbeta-lactamase domain protein 
Protein accessionYP_002975381 
Protein GI241204285 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.163514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000581399 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAAGC ACGATTACCA CCTCTCGAGA CGTGGCTTCT GCCTCTGCTG CCTCGGCGGC 
GCGACCTTCG CGGCCACGGG CGGCTGGCTG ACTCCGGCCG AGGTTTTCGC CGCCGCCAAA
AGTCTCGTTG TCCAGATCCG CGAAGCAGCC GCCACAGCGG ATATCACGAC GACCAAGCTA
CGCGGCGGCA TCAGTGCGTT GTCCGGTTCC GGTGGCAACA TGGGCGTCCT CGTCGGCGAC
GACGGGAAGC TCCTTGTCGA CGCCGGGATC ACCGCGACGC GTCCCAAGAT CGAGAAGGTG
CTCGCCGATC TCGGGCCACA GCCGATCAAG CATCTCATCA ACTCGCATTG GCACTTCGAT
CATACGGATG GCAACGAGTG GCTGAATTCG GAGGGGGCGA TGATCATGGC CCATCCGAAC
TCGCTGAAGC ACCTGACGGT CGCCACCCGC GTCGTCGACT GGGACTTCGA CTTCCCGGCG
TCGCCAAAGG GGGCGCTGCC GACGATGCTG ATGAAGGGCG ACGAGGAGAC GCTCAAGCAA
AACGGCCAGA CGATCAAGTT GAAGTACTAT GGCCCGGCGC ATACCGACAG CGACATCTCG
GTGTTCTTCC AGGAGGCGAA TGTCGTCCAT GTCGCCGACA CCTTCTGGAA CGGCGTCTAC
CCCTTCATCG ACTATTCGAC GGGCGGCAGC ATCGACGGAC AGATCCAGGC CGCCGAGGCC
AACGTCAAGA TGGTCGACGA CCAGACGATC GTCATTCCCG GACATGGGGA GATTGGCAAC
AAGAAGGATC TCATCGATTG GCGGGACATG CTCGTCGGCA TCCGCGAAAA CGTCGCCAAG
TTGAAAAAGG ATGGTCGGAG CGTAGAAGAA ACGATCGCGG CGAAACCAAC GGCAAAATGG
GATTCCGTTT TCGGCAACTG GGCGATTTCG CCTGCATTGT TCACCCGACT TGCCTATGAA
GGCGTCTAA
 
Protein sequence
MTKHDYHLSR RGFCLCCLGG ATFAATGGWL TPAEVFAAAK SLVVQIREAA ATADITTTKL 
RGGISALSGS GGNMGVLVGD DGKLLVDAGI TATRPKIEKV LADLGPQPIK HLINSHWHFD
HTDGNEWLNS EGAMIMAHPN SLKHLTVATR VVDWDFDFPA SPKGALPTML MKGDEETLKQ
NGQTIKLKYY GPAHTDSDIS VFFQEANVVH VADTFWNGVY PFIDYSTGGS IDGQIQAAEA
NVKMVDDQTI VIPGHGEIGN KKDLIDWRDM LVGIRENVAK LKKDGRSVEE TIAAKPTAKW
DSVFGNWAIS PALFTRLAYE GV