Gene Rleg_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1538 
Symbol 
ID8012619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1520294 
End bp1520989 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID644824125 
Productmajor intrinsic protein 
Protein accessionYP_002975367 
Protein GI241204271 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.210422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCG GACACCTGAG GCTGGTTCCG AAGCCTCTAC CGAGATGTTT CGTCGAAGAC 
GGCAGCGCCT CACTGCTCCG TCGATCTCTG GCCGAAGGCG TTGGAACAGC CATGCTGTTG
CTCGTGGTCG TCGGATCCGG CCTCCATGGC GGCAGCTCGG AGGTCTCGTC GGCGTTATCG
ATCTCGGGGA GCCTGATCGG TTTGATCTTG GCCTTCGGCG CGGTTTCGGG AGGGCACTTC
AACCCTACCA TCACGCTGGT GCAATGGCTT TTTGGACGAC GGCAACTGGA CTGCACGGCA
TGGTATCTAG CCGCCCAGGT CGCAGGTGGT CTGGCGGGTG CGCTGGTGGC CTGTGCGATT
TTCAAAAAGG TGCCGGGGCA GCCGGGTGAT GGCCTCCCCG ACATGGCCGC ACTAGCAAGC
GAGGGGGTGG CGTCATTCGG TCTTATGACC ATTGTTTTTT GTTGTACGCG CAGCACCAGC
AAGCTCGTCG GACCATTCGC TGTCGGCCTC TGGCTGATGG CCGCAATTTT GTCCACGCCC
ACCGGTTCGA TCGCGAACCC GGCCGTAGCG GTGGCGCTGC TCGCGACACC CGACGGCGCA
TCGGTGCCTG GTACGCTATT GTTCGTCATC GTGGAGATCG CCGGTGGAGC CCTTGCCGCA
TTGACGGTAG CGACGGTCTA TCCAGATGGA GGTTAA
 
Protein sequence
MDSGHLRLVP KPLPRCFVED GSASLLRRSL AEGVGTAMLL LVVVGSGLHG GSSEVSSALS 
ISGSLIGLIL AFGAVSGGHF NPTITLVQWL FGRRQLDCTA WYLAAQVAGG LAGALVACAI
FKKVPGQPGD GLPDMAALAS EGVASFGLMT IVFCCTRSTS KLVGPFAVGL WLMAAILSTP
TGSIANPAVA VALLATPDGA SVPGTLLFVI VEIAGGALAA LTVATVYPDG G