Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1538 |
Symbol | |
ID | 8012619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1520294 |
End bp | 1520989 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824125 |
Product | major intrinsic protein |
Protein accession | YP_002975367 |
Protein GI | 241204271 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.210422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCCG GACACCTGAG GCTGGTTCCG AAGCCTCTAC CGAGATGTTT CGTCGAAGAC GGCAGCGCCT CACTGCTCCG TCGATCTCTG GCCGAAGGCG TTGGAACAGC CATGCTGTTG CTCGTGGTCG TCGGATCCGG CCTCCATGGC GGCAGCTCGG AGGTCTCGTC GGCGTTATCG ATCTCGGGGA GCCTGATCGG TTTGATCTTG GCCTTCGGCG CGGTTTCGGG AGGGCACTTC AACCCTACCA TCACGCTGGT GCAATGGCTT TTTGGACGAC GGCAACTGGA CTGCACGGCA TGGTATCTAG CCGCCCAGGT CGCAGGTGGT CTGGCGGGTG CGCTGGTGGC CTGTGCGATT TTCAAAAAGG TGCCGGGGCA GCCGGGTGAT GGCCTCCCCG ACATGGCCGC ACTAGCAAGC GAGGGGGTGG CGTCATTCGG TCTTATGACC ATTGTTTTTT GTTGTACGCG CAGCACCAGC AAGCTCGTCG GACCATTCGC TGTCGGCCTC TGGCTGATGG CCGCAATTTT GTCCACGCCC ACCGGTTCGA TCGCGAACCC GGCCGTAGCG GTGGCGCTGC TCGCGACACC CGACGGCGCA TCGGTGCCTG GTACGCTATT GTTCGTCATC GTGGAGATCG CCGGTGGAGC CCTTGCCGCA TTGACGGTAG CGACGGTCTA TCCAGATGGA GGTTAA
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Protein sequence | MDSGHLRLVP KPLPRCFVED GSASLLRRSL AEGVGTAMLL LVVVGSGLHG GSSEVSSALS ISGSLIGLIL AFGAVSGGHF NPTITLVQWL FGRRQLDCTA WYLAAQVAGG LAGALVACAI FKKVPGQPGD GLPDMAALAS EGVASFGLMT IVFCCTRSTS KLVGPFAVGL WLMAAILSTP TGSIANPAVA VALLATPDGA SVPGTLLFVI VEIAGGALAA LTVATVYPDG G
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