| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1482 |
|---|
| Symbol | |
|---|
| ID | 8012568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1468098 |
|---|
| End bp | 1469360 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644824071 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002975313 |
|---|
| Protein GI | 241204217 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.340124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGT TTTTGACCAC GACCGCAATG ATCGCGTTGG CTCTGGCCGG CGCTGGCGTG
TCCGCCCACG CCGCCGACGT GAAGGAAGTG CAGATGCTGC ACTGGTGGAC GTCTGGTGGC
GAGGCGGCGG CGCTGAACGT CTTGAAGCAG GATCTTTCGA AGGAAGGTTT TGCCTGGAAG
GACGTGCCTG TTGCTGGCGG TGGCGGCGAT GCGGCGATGA CGGCGCTGAA GGCGATGGTT
GCGGCCGGCA CCTATCCGAC GGCCTCGCAG ATGCTGGGCT ATACCGTGCT CGATTATGCT
CAGGCCGGCG TCATGGGCGA TCTGACGGAG ACGGCCAAGA AGGAAGGCTG GGACAAGTCG
GTTCCGGCAG CGCTGCAGAA GTTCTCGGTC TATGACGGCA AGTGGGTCGC AGCCCCCGTC
AACGTCCACT CGGTCAACTG GCTGTGGATC AACAAGGCTG TGATGGACAA GATCGGCGGC
ACCCAGCCGA AGACCTTCGA CGAGCTGATC GCCCTGCTCG ACAAGGCGAA GGCCGCAGGC
GTCATCCCGC TGGCTCTCGG CGGCCAGAAC TGGCAGGAGG CGACGATGTT CGATTCCATC
GTGCTGTCGA CCGGCGGGCC GGAGTTCTAC AAGAAGGCCT TCAACGACCT CGACGAGGAA
TCGCTGAAGT CCGACACGAT GAAGAAGTCG TTCGACAATC TGGCGACGAT CATCAAATAT
GTCGACCCGA ACTTCTCGGG CCGCGACTGG AACCTGGCAA CCGCCATGGT CATCAAGGGT
GACGCGCTAG TGCAGGTGAT GGGCGACTGG GCCAAGGGCG AATTCGTCGC CGCCAAGAAG
ACGCCGGATA CCGACTTCCT GTGCTACCGC TTCCCCGGCA CCGACGGCAG CGTCGTCTAC
AACTCCGACA TGTTCGGCAT GTTCAACGTT CCCGACGACC GCAAGGCGGC CCAGGTGGCG
CTGGCGACCG CAACGCTGTC GAAGAGCTTC CAGTCGGCCT TCAACGTCGT CAAGGGTTCG
GTGCCGGCTC GTACCGACGT TCCCGATACC GACTTCGATG CTTGCGGCAA GAAGGGCATC
GCCGACCTGA AGGCAGCCAA CGAAGGCGGC ACGCTGTTCG GCTCGCTGGC ACAGGGCTAC
GGCGCTCCTC CGGCGATCGC CAATGCCTAC AAGGATGTCG TCTCGAAGTT CGTCCACGGC
CAGATCAAGA CCTCCGACGA AGCCGTCAAG CAGCTCGTCC AGGCGATCGA CGACGCCCGC
TGA
|
|---|
| Protein sequence | MNKFLTTTAM IALALAGAGV SAHAADVKEV QMLHWWTSGG EAAALNVLKQ DLSKEGFAWK
DVPVAGGGGD AAMTALKAMV AAGTYPTASQ MLGYTVLDYA QAGVMGDLTE TAKKEGWDKS
VPAALQKFSV YDGKWVAAPV NVHSVNWLWI NKAVMDKIGG TQPKTFDELI ALLDKAKAAG
VIPLALGGQN WQEATMFDSI VLSTGGPEFY KKAFNDLDEE SLKSDTMKKS FDNLATIIKY
VDPNFSGRDW NLATAMVIKG DALVQVMGDW AKGEFVAAKK TPDTDFLCYR FPGTDGSVVY
NSDMFGMFNV PDDRKAAQVA LATATLSKSF QSAFNVVKGS VPARTDVPDT DFDACGKKGI
ADLKAANEGG TLFGSLAQGY GAPPAIANAY KDVVSKFVHG QIKTSDEAVK QLVQAIDDAR
|
|---|
| |