| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1386 |
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| Symbol | |
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| ID | 8012479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 1372302 |
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| End bp | 1374674 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644823971 |
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| Product | ribonuclease R |
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| Protein accession | YP_002975217 |
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| Protein GI | 241204121 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.365928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGGA TACCGCGCGA AAGAACAAAT CCCGCGGGCA AGCGCCCGGG CAAGACCGGA
CACGCCAGCA AGGATGCTCC CGCCGTCGAG CCGCTGAACA TCGTCCACGG CGCGCTGCCT
TCACGCGAGG TGATTCTGCG CTTCATCGCC GATCATCCGC AGAAAGCGTC CAAGCGTGAA
CTCGCCAAAG CTTTCGGCCT GAAAGGCGAT AGCCGCGTCG AGCTCAAGCA GATGCTGCAG
GAGCTCGAGC AGGAAGGGAT GCTGCAGAAG AACCGCAAGT CGCTGATCCG TCCCGGTGCG
CTGCCGCCTG TCACCGTTCT CGATATCACC ACACGCGACA AGGACGGCGA TCTGATCGGC
CGGCCGGCGG AATGGCCTGA GGATCAGGGC GTAGCGCCGG CTGTCGCCAT CCGCCAGCAA
TCGCCCGCAG GCCGCCAGGG CAAGGGCAAG ACGCCCGTCG CCGGGCTCGG AGACCGTATC
CTGGCAAAAA TCTTCCCGGC CGTCGATCGC GGCGGGCCGG CCTATACGGC GCGGATCATC
AAGGTGATCG ACAGGCGCCG CGGCGCGTCG ATGGGCGTTT TCCGCACTGC ACCTGATGGT
GGCGGCCGGC TGCTGCCGAT CGAACGGCGC GGCGAAGAGA TGGTGATCGC TCCCGACTTC
ACCGGCGGCG CTACCGACGG CGATCTGGTG GAAGTCGAGA TCGCCCGTCT CGGCCGTTTC
GGCCTGCCGC GCGCCAAGGT ACTTTCCGTC GTCGGTTCCG TCGGTTCGGA AAAAGCGCTC
TCGATGATCG CGATCCATGC CCACGGCATT CCGCATGTCT TCCCGCCGGC CGTCATCGCC
GAAGCGGAAG CTGCAAGGCC CGCCACGATG TCGCATCGCG AGGATTGGCG CGACGTACCG
CTGATCACCA TCGACCCGGC CGATGCCAAG GACCATGACG ACGCTGTTTA TGCCGAGCTC
GATCCCTCGC CCGACAATCC CGGCGGCGTC ATTGTGACCG TCGCGATTGC CGACGTCTCC
TGGTATGTTC GCCCCAATTC GCCGCTCGAT CGCGAGGCGC TGAAACGCGG CAACTCCGTC
TATTTCCCCG ATCGCGTCGT GCCGATGCTG CCCGAGCGCA TCTCCAACGA TCTCTGCTCG
TTGAAGCAAG GTGTCGACCG CCCGGCGCTC GCCGTGCGCA TGAGCTTTTC CGGGGAAGGC
CGCAAGATCG GCCACATCTT TCATCGCATC ATGATGAAGA GTGCCGCCAA GCTCTCCTAC
CAGCAGGCGC AGGCGGCGAT CGACGGAAGG CCGGACGATC AGACCGGCCC GATGCTCGAA
CCGATCCTGA AGCCGCTCTG GCACGCCTAT GAGGTGATGA AGCGCGGACG CGACCGGCGC
CAGCCGCTGG AACTCGACAT GCCGGAGCGC AAGATCCTCC TGAAGTCCGA CGGCACGGTC
GACCGGGTGG TCGTGCCGCC ACGGCTCGAT GCGCATAAGC TGATCGAAGA GATGATGATC
CAGGCGAATG TCTGCGCGGC CGAGACGCTC GAAAAGAAGC GTCAGCCGCT GATCTACCGC
ATCCATGACG GCCCGACGCT TGCCAAGCAG GAGATCCTGC GCGAGTTCCT GGCCACGCTC
GGCATCTCGC TTGCCAAGGG CGGCAACATG CGCGCCAACA ACTTCAACGG CATTCTGGCG
AAGGCGGACG GCACGCCGCA TCAGACCATG GTGAGCGAGA TGGTGCTGCG TTCGCAGAGC
CAGGCGATCT ATGGCCCGGA GAATATCGGC CATTTCGGCC TCAACCTGAT GAAATACGCC
CACTTCACCT CGCCGATCCG CCGTTATGCC GACCTCATCG TGCATCGCGC CCTCGTCGGC
TCGCTCGGCT TCGGCGAAGG CGGCATCACG CCCGAAGAAG AGGCCGCGCT CGACGATATC
GCTGCCGAAA TCTCGACCTT CGAACGCCGG GCCATGGCAG CCGAGCGCGA GACCGTCGAC
CGGCTGATCG CGCATCACCT CAGCGGTCGC GTCGGCGAGG AATTTGCCGG GCGGGTTTCG
GGCGTGACGA AATCGGGAGT TTTTATCGCC CTGCCGGACT ATGGCGCCGA TGGTTTCGTC
CCTATATCTA CGCTCGGCAG CGATTATTTC ATCTATGACG AGGCGCATCA GGCACTCTCC
GGTGAAAAGA CCGGGCTTGG TTATCGCCTG GGCGACAGCG TCACCGTCAA ACTTGCCGAA
GCGATCCCGC TTGCCGGTGC ACTGCGTTTC GAGATGATCA GCGAGGGCCG TGAGATGCCG
GCGGCGGTGC GCTCCTTCCA TAAAGCGGGG CGCCGCGACA GGGGCCAGAT TCGCAAGAAG
CCCGGAACGA GGCCGCCGCG CGGACGGCAC TAA
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| Protein sequence | MSRIPRERTN PAGKRPGKTG HASKDAPAVE PLNIVHGALP SREVILRFIA DHPQKASKRE
LAKAFGLKGD SRVELKQMLQ ELEQEGMLQK NRKSLIRPGA LPPVTVLDIT TRDKDGDLIG
RPAEWPEDQG VAPAVAIRQQ SPAGRQGKGK TPVAGLGDRI LAKIFPAVDR GGPAYTARII
KVIDRRRGAS MGVFRTAPDG GGRLLPIERR GEEMVIAPDF TGGATDGDLV EVEIARLGRF
GLPRAKVLSV VGSVGSEKAL SMIAIHAHGI PHVFPPAVIA EAEAARPATM SHREDWRDVP
LITIDPADAK DHDDAVYAEL DPSPDNPGGV IVTVAIADVS WYVRPNSPLD REALKRGNSV
YFPDRVVPML PERISNDLCS LKQGVDRPAL AVRMSFSGEG RKIGHIFHRI MMKSAAKLSY
QQAQAAIDGR PDDQTGPMLE PILKPLWHAY EVMKRGRDRR QPLELDMPER KILLKSDGTV
DRVVVPPRLD AHKLIEEMMI QANVCAAETL EKKRQPLIYR IHDGPTLAKQ EILREFLATL
GISLAKGGNM RANNFNGILA KADGTPHQTM VSEMVLRSQS QAIYGPENIG HFGLNLMKYA
HFTSPIRRYA DLIVHRALVG SLGFGEGGIT PEEEAALDDI AAEISTFERR AMAAERETVD
RLIAHHLSGR VGEEFAGRVS GVTKSGVFIA LPDYGADGFV PISTLGSDYF IYDEAHQALS
GEKTGLGYRL GDSVTVKLAE AIPLAGALRF EMISEGREMP AAVRSFHKAG RRDRGQIRKK
PGTRPPRGRH
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