| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1128 |
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| Symbol | |
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| ID | 8012247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1104926 |
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| End bp | 1106293 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644823711 |
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| Product | multi antimicrobial extrusion protein MatE |
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| Protein accession | YP_002974962 |
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| Protein GI | 241203866 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.21564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TTTCCGAAGG CAATGCCTTT CTCACCGGCT GGCTGCCGGG CGTCTTCATC
AAAACGGCGG CACCGATCGT CGCGATCACC ACCGTCAACG GCCTGTTCAC CGTCGTCGAC
GCCTATTTCC TTGGCGCCTA TGTCGGCCCG GATGCGCTCT CTGCCGTCAG CCTGATTTTT
CCCGGTTTGA TGCTGCTGGT CGCCCTGCAA TCGCTGGTCT CGAACGGTAT GGCGAGTATC
CTCGCCCGCC GGCTCGGCGC CGGCGATCGT CAAGGCGCGC GTCGGGTGTT TGCCGGCGCG
CATGCGCTAG CGCTCGCCGT CACCCTCATC CTCAATCTGG TCTACTGGAT CGTTGGCCGA
CAGATCATCG ATGCCGGTGC TGCCGGCAAT GCTGCCGTGG CCGATGGCGC CATGCTGTTC
ATGGGCGCGA TGATCGCCTG TGCGCCGATC AGCTTCTTCC TGTCGCTGCA TCTCGACGGG
CTGCGCTGCG AAGGCAAGAT CGGTTTCATG ACCTTGGTGA CGCTGTCGGC CTCGCTGCTC
AACATCTTCG CCAACTGGCT GTTCATGGCG GTGATGCATT GGGGCGTGCT CGGTTCGGCA
GCCGGCTCCA TCGCATCGCA ATGCGTCTGT CTCGCAGCCG TGCTCGCCTT TCGCTGGCGC
CGGCCGGCGG CACTAAGGCC GTCTCCGGGG TTGGCTCTTG CCGAATGGCG CGGCATCGTC
GCCTTCGGCG CGCCGATGAG CCTCGGTTTC ATCGGCATAT CGCTGGCCTC GGCCGCCATT
CTGATCAACA TCTCTCTCTG GAGCGAACAT GACTATGTCG CGACGGTGGC CGCCTACGGC
ATCATCACCC GGATCATGAC CTTCACCTAT CTGCCGCTGC TTGGTCTCAG CATCGCGCTG
CAGACGGTCG CCGGCAACAA TCACGCCGCC GGCCTCCGGC TCCGCGTCGG CCGCAGCCTG
CAGATCGCCA TGCTCGCCGC ACTCGTCTAT TGCACCCTGG TGGAGATCAT CGTCGAGCTG
CTGGCCGGCC GCCTCGGCGC CGTCTTCGTC GCCGATCCCG CGATCATTGC CGAGGTCAGG
CGAATTCTGC CCTGGACGAT CGGCGCCTAT TTTCTCTTCG GGCAGATGAT GATCCTGTCA
TCCTATTTCC AGTCGATCGG CGATGCGCCG CGTGCGGCGA TCTTTGGCCT GTCGCGGCCC
TATCTGCTCA CCCTGCCGCT TACCTTCCTG CTACCCTTCG TCTTCGGCGA ACAGGGGATC
TGGATGGTGC CGGTCTTTGC CGAGGCAGGC ATGTTCATCC TTGCCTTCCT GGTGCTGTCG
CAGAACGCCA AACGCCGGGG CTGGCGGTAC GGGCTTCTGT CCGTCTAA
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| Protein sequence | MTDLSEGNAF LTGWLPGVFI KTAAPIVAIT TVNGLFTVVD AYFLGAYVGP DALSAVSLIF
PGLMLLVALQ SLVSNGMASI LARRLGAGDR QGARRVFAGA HALALAVTLI LNLVYWIVGR
QIIDAGAAGN AAVADGAMLF MGAMIACAPI SFFLSLHLDG LRCEGKIGFM TLVTLSASLL
NIFANWLFMA VMHWGVLGSA AGSIASQCVC LAAVLAFRWR RPAALRPSPG LALAEWRGIV
AFGAPMSLGF IGISLASAAI LINISLWSEH DYVATVAAYG IITRIMTFTY LPLLGLSIAL
QTVAGNNHAA GLRLRVGRSL QIAMLAALVY CTLVEIIVEL LAGRLGAVFV ADPAIIAEVR
RILPWTIGAY FLFGQMMILS SYFQSIGDAP RAAIFGLSRP YLLTLPLTFL LPFVFGEQGI
WMVPVFAEAG MFILAFLVLS QNAKRRGWRY GLLSV
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