Gene Rleg_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0589 
Symbol 
ID8015458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp617511 
End bp618488 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content57% 
IMG OID644823179 
ProductPyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_002974432 
Protein GI241203336 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.317199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.258859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC AAACACCTCT TTCAGCCGCC AAAATCGACG ATGCACGCAA AAAAATCGAT 
CCGATTTTCC TGAACACCAA CTTGTTGCGT GCCGATAGGC TCGCGCTGTC ACTCGTCGCC
AAGGACGAAA CGGAAAATCC CATCCGCAGC TTCAAGGGGC GCGGGACGGG GTATTTTCTC
GCCGACGTCG TTGGAGACAG AACTCCTCTG GTCACGGCAT CAGCCGGGAA TTTCGGCCAG
GGGCTTGCTT ACAATGCCGC GCGGCATGGG CGATCTCTGG TCGTGTTCGC CAGTGTCAAC
GCCAATCCGT TGAAGATCGA AGCCATGCGC CGGTTTGGGG CAGAAGTCTT TCTCGCCGGA
GAAGATTTTG ACGCTGCAAA GGAGGCCGCC AAAATCTACG CCGCCGAACG GAAGCTGCAG
TTCGTCGAGG ATGGAGCGAG CGCAGCCATT GCCGAAGGAG CAGGAACGAT TGCGGCGGAG
CTGACTGAAG AGGTCGAAGA TATCGACGCC GTTTTCATAC CGCTCGGCAA CGGTGCTCTG
GCGGCCGGAA TAGGATGCTG GTTCAAATCA CGATCACCGC GAACAAGGGT CGTCGCAGTC
GCCGCAAAGG GCGCACCTTG CATGGCACTG TCCTACAATG CGGGTGACGT GATCTCAACG
CCGGAGGCAC GCACGATTGC CGATGGAATT GCTGTGCGGA TTCCCGTCCC GTCGGCCGTC
GGCTGGCTTA AAGACACGAT CGATGACGTC GTTCTCGTGG ATGACGATCA GCTTCTCGAT
GCAATGCGAT TTGCTCATGA CACATGGAAG CGTCTCGTCG AACCAGCCGG AGCAGCCGGG
CTCGCTGCTA TTCTTGAGCA GGCATCTGCC CTGAAAGGCT GCCGTGTAGC GACTATGTTG
TGTGGTGCTA ACCTCACGGA TCAACAGATC AAGGCATGGC TTCCATCTGC CATAAAGCAC
AACACGAATG CCTGCTAG
 
Protein sequence
MTKQTPLSAA KIDDARKKID PIFLNTNLLR ADRLALSLVA KDETENPIRS FKGRGTGYFL 
ADVVGDRTPL VTASAGNFGQ GLAYNAARHG RSLVVFASVN ANPLKIEAMR RFGAEVFLAG
EDFDAAKEAA KIYAAERKLQ FVEDGASAAI AEGAGTIAAE LTEEVEDIDA VFIPLGNGAL
AAGIGCWFKS RSPRTRVVAV AAKGAPCMAL SYNAGDVIST PEARTIADGI AVRIPVPSAV
GWLKDTIDDV VLVDDDQLLD AMRFAHDTWK RLVEPAGAAG LAAILEQASA LKGCRVATML
CGANLTDQQI KAWLPSAIKH NTNAC